Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 SNORD56.4-201ENST00000363883 71 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 RNA5SP235-201ENST00000365411 114 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 RNU6-609P-201ENST00000365459 107 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 U3.39-201ENST00000408569 239 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AL606495.1-201ENST00000422100 813 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AL590762.3-201ENST00000436372 640 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 FABP5P3-201ENST00000437960 408 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AL035407.2-201ENST00000454090 378 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AC084357.1-201ENST00000473404 255 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 TGIF1P1-201ENST00000558095 802 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AC079148.1-201ENST00000565944 819 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AC113194.1-201ENST00000606037 500 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AC104446.1-201ENST00000613728 1321 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 AC138915.3-201ENST00000562908 1389 ntBASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLIP2Q9UDT6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AL512646.1-201ENST00000269395 1077 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 RNU1-33P-201ENST00000364249 162 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 RNA5SP267-201ENST00000364893 126 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 DNAJC19P6-201ENST00000401853 280 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 RNU4-27P-201ENST00000410889 139 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 HSFY4P-201ENST00000415994 1181 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 RPL29P29-201ENST00000448725 423 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC104978.1-201ENST00000449387 391 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 RPS20P32-201ENST00000456044 356 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC078857.1-201ENST00000469870 667 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 RPL21P47-201ENST00000483696 477 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 SETP14-201ENST00000497538 873 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AL358832.1-201ENST00000497800 389 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 IGKV2-26-201ENST00000518305 343 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC012254.4-201ENST00000588843 273 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 RPL21P136-201ENST00000605378 396 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 RMST_10.1-201ENST00000616309 154 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AC121761.2-201ENST00000617300 689 ntBASIC4.09□□□□□ -1.75
CLIP2Q9UDT6 AL645937.1-201ENST00000641739 1652 ntBASIC4.09□□□□□ -1.76
CLIP2Q9UDT6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLIP2Q9UDT6 AC046144.1-201ENST00000478559 1853 ntBASIC4.09□□□□□ -1.76
CLIP2Q9UDT6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.09□□□□□ -1.76
CLIP2Q9UDT6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLIP2Q9UDT6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLIP2Q9UDT6 AC091152.2-201ENST00000591628 2569 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 HSPE1P26-201ENST00000405341 275 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 MTCO3P31-201ENST00000405526 789 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 BX323014.1-201ENST00000412876 237 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AL049610.1-201ENST00000423374 372 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 RPL17P35-201ENST00000432217 549 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 MRPS18BP2-201ENST00000434310 759 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 MTND5P3-201ENST00000438536 1800 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 TXNP1-201ENST00000441872 371 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 MTND5P1-201ENST00000445440 1375 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC023598.1-201ENST00000472521 361 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC126121.1-201ENST00000482313 553 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC139103.1-201ENST00000534696 1030 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC011602.1-201ENST00000546484 331 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC011611.1-201ENST00000552179 197 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 PWAR6-201ENST00000552334 4618 ntBASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.08□□□□□ -1.76
CLIP2Q9UDT6 AL161756.2-201ENST00000604597 246 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms