Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 OR8R1P-201ENST00000543943 764 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 HSPE1P3-201ENST00000559254 309 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC022655.2-201ENST00000577280 318 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 AL020997.2-201ENST00000602607 184 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC092354.1-201ENST00000606057 376 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 AL158063.1-201ENST00000615349 536 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC019278.1-201ENST00000623516 479 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC112484.5-201ENST00000624189 228 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 ASNSP1-201ENST00000518311 1939 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL20A1Q9P218 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL20A1Q9P218 MAPK10-286ENST00000641208 8747 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC093535.2-201ENST00000624769 2326 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 RNU6-374P-201ENST00000364146 108 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 RNU6-1226P-201ENST00000384317 107 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 HMGB1P17-201ENST00000403495 628 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 RNA5SP296-201ENST00000410523 111 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 RPL7P8-201ENST00000411964 730 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 VDAC1P9-201ENST00000412766 841 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 BTF3L4P1-201ENST00000413813 468 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 NPM1P11-201ENST00000417106 855 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC073136.2-201ENST00000417282 849 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 AL049610.1-201ENST00000423374 372 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 ZYG11AP1-201ENST00000430329 837 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 TMX2P1-201ENST00000436507 708 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 RPL23AP74-201ENST00000437246 471 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC092473.1-201ENST00000441098 221 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 RPS29P19-201ENST00000479709 171 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 HIGD1AP10-201ENST00000527837 282 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC022916.3-201ENST00000592961 742 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC012557.2-201ENST00000605919 418 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 AC106028.5-201ENST00000610332 395 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 AL161637.1-201ENST00000622380 412 ntBASIC4.78□□□□□ -1.64
COL20A1Q9P218 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL20A1Q9P218 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.78□□□□□ -1.64
COL20A1Q9P218 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 RNU6-623P-201ENST00000363143 105 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 RNA5SP22-201ENST00000365393 109 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 RNU6-723P-201ENST00000383973 107 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 Y_RNA.436-201ENST00000384097 102 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 SNORA26.8-201ENST00000391306 124 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 RPL21P65-201ENST00000406094 466 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 RPS15AP40-201ENST00000419621 391 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 NPM1P34-201ENST00000428821 893 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 MTCO2P16-201ENST00000436962 677 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 SNRPEP7-201ENST00000438350 220 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.77□□□□□ -1.65
COL20A1Q9P218 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 AL589765.3-201ENST00000446084 462 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL20A1Q9P218 ARPC3P5-201ENST00000448802 534 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 RPL36AP33-201ENST00000450395 310 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 HMGB3P21-201ENST00000452483 547 ntBASIC4.77□□□□□ -1.65
COL20A1Q9P218 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms