Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC008033.1-201ENST00000216407 1162 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 RNA5SP239-201ENST00000410218 129 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 RPS7P15-201ENST00000415804 584 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC245052.5-201ENST00000416320 649 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC127526.1-201ENST00000417526 366 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 Z74021.1-201ENST00000423610 407 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 RBMY2QP-201ENST00000429799 1147 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC112498.1-201ENST00000444401 332 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC002381.1-201ENST00000447049 280 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC097262.1-201ENST00000452559 548 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 NDUFA5P9-201ENST00000472609 340 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AP000926.1-201ENST00000479573 241 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC106872.2-201ENST00000494303 480 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC022447.3-201ENST00000506865 495 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC005178.1-201ENST00000508392 440 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC005921.1-201ENST00000510589 286 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 MTCYBP43-201ENST00000513621 740 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 OR5AP1P-201ENST00000529730 940 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 OR4P1P-201ENST00000530808 1136 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC092851.1-201ENST00000535964 478 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 RFPL1S-203ENST00000539579 330 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AL121603.1-201ENST00000553815 142 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC112187.2-201ENST00000604345 283 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC128687.1-201ENST00000605304 619 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AL356585.4-201ENST00000623078 1229 ntBASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB16Q9NRJ7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 RNU6-553P-201ENST00000364047 96 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 SNORA7.2-201ENST00000364446 145 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 RNU6-343P-201ENST00000364709 104 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 MIR320C1-201ENST00000408566 88 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 CHEK2P3-201ENST00000416118 248 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 Z99497.1-201ENST00000421282 135 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AL512649.1-201ENST00000428997 581 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AC016712.1-201ENST00000431088 378 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 MTND4LP10-201ENST00000435146 291 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 VN1R54P-201ENST00000435210 1049 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AURKAPS2-201ENST00000454983 333 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 RNU7-125P-201ENST00000458760 62 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 RPS4XP10-201ENST00000465034 731 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AC004453.1-201ENST00000487895 408 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AC007686.1-201ENST00000488511 463 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 POU5F1P7-201ENST00000508759 541 ntBASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHB16Q9NRJ7 AC006499.6-201ENST00000511169 607 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms