Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC022861.1-201ENST00000522981 663 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 CYCSP40-201ENST00000575927 294 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 MAGOH2P-202ENST00000584384 429 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.16□□□□□ -1.58
VTA1Q9NP79 BNIP3P23-201ENST00000599655 511 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC018755.4-201ENST00000619715 454 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC093591.3-201ENST00000634516 308 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC010300.1-201ENST00000600671 5134 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 OR11H5P-202ENST00000641612 1325 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC006378.2-201ENST00000623178 2476 ntBASIC5.16□□□□□ -1.58
VTA1Q9NP79 AC097714.1-201ENST00000511272 1647 ntBASIC5.15□□□□□ -1.58
VTA1Q9NP79 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VTA1Q9NP79 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VTA1Q9NP79 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.15□□□□□ -1.58
VTA1Q9NP79 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.15□□□□□ -1.58
VTA1Q9NP79 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 RNA5SP479-201ENST00000364858 117 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 RNU5E-5P-201ENST00000365379 116 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 Y_RNA.517-201ENST00000384551 106 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 BTBD10P2-201ENST00000404779 676 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 AL590609.2-201ENST00000421430 368 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 EIF4HP2-201ENST00000424380 563 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 NPM1P34-201ENST00000428821 893 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 MTND5P14-201ENST00000441481 1267 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 MTND1P27-201ENST00000451117 902 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 CYCSP34-201ENST00000458172 304 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 SNORD42A-201ENST00000459584 64 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 RPL31P50-201ENST00000471002 296 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 RN7SL41P-201ENST00000476144 297 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC017015.1-201ENST00000477387 286 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 OR5AP1P-201ENST00000529730 940 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 AL109766.1-201ENST00000555080 552 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC087477.6-201ENST00000559595 843 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 MIR3160-1-201ENST00000577972 85 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 AP003465.2-201ENST00000602571 373 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC007566.2-201ENST00000603642 413 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC097468.3-201ENST00000607956 456 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AC114781.5-201ENST00000615297 108 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 AL445264.1-201ENST00000621719 171 ntBASIC5.15□□□□□ -1.59
VTA1Q9NP79 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VTA1Q9NP79 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
VTA1Q9NP79 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VTA1Q9NP79 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VTA1Q9NP79 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VTA1Q9NP79 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 SNORA68.2-201ENST00000391263 128 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC016769.3-201ENST00000396562 315 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 AL031679.1-201ENST00000400616 525 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 HSPE1P28-201ENST00000443139 211 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 PDSS1P2-201ENST00000449397 678 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 RN7SL98P-201ENST00000462271 300 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VTA1Q9NP79 ZNF519P3-201ENST00000557158 1032 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 BNIP3P5-201ENST00000562290 498 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms