Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.54□□□□□ -1.68
USP29Q9HBJ7 GTF2IP22-201ENST00000554443 182 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.54□□□□□ -1.68
USP29Q9HBJ7 SERPINE4P-201ENST00000554978 281 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 EIF5A2P1-201ENST00000564027 460 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 AC136618.2-201ENST00000575091 400 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 MIR4512-201ENST00000583257 77 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.54□□□□□ -1.68
USP29Q9HBJ7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.54□□□□□ -1.68
USP29Q9HBJ7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP29Q9HBJ7 AC083899.3-201ENST00000603413 594 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 Z98200.1-201ENST00000607298 470 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 AC020634.1-201ENST00000608701 549 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 AC025594.3-201ENST00000613068 790 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 AL138721.1-201ENST00000616756 179 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP29Q9HBJ7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
USP29Q9HBJ7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.54□□□□□ -1.68
USP29Q9HBJ7 AC007529.1-201ENST00000418574 2178 ntBASIC4.54□□□□□ -1.68
USP29Q9HBJ7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP29Q9HBJ7 LINC00561-201ENST00000565815 2738 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 RAD17P1-201ENST00000418130 2042 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 OR52B1P-201ENST00000316506 909 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 RNU1-130P-201ENST00000363930 160 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 RNU6-444P-201ENST00000383988 108 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 SNORA11-201ENST00000408789 128 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 EPS15P1-201ENST00000448836 336 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 RNU6-956P-201ENST00000458868 103 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC079804.1-201ENST00000461922 436 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 RPS27AP17-201ENST00000463344 455 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC053481.1-201ENST00000467217 306 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC011276.1-201ENST00000469688 323 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC010618.1-201ENST00000469924 477 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 RPS26P28-201ENST00000470806 348 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC109327.1-201ENST00000471666 403 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC116337.2-201ENST00000477662 156 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 RNA5SP497-201ENST00000516081 97 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 RN7SKP21-201ENST00000516503 220 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 RN7SKP96-201ENST00000516948 297 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AP000873.5-201ENST00000533906 236 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 CYCSP2-201ENST00000558168 301 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC090515.3-201ENST00000560431 315 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC124068.1-201ENST00000563131 678 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC007599.1-201ENST00000568688 1174 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC074051.3-201ENST00000570238 358 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 MIR3611-201ENST00000584484 83 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC107982.3-201ENST00000584957 985 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC128687.1-201ENST00000605304 619 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC090948.1-201ENST00000607464 549 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC092354.2-201ENST00000607786 514 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC239868.4-201ENST00000608318 671 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC012409.3-201ENST00000611343 981 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC068831.8-201ENST00000620171 435 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC011944.2-201ENST00000624440 683 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AC079228.1-201ENST00000624774 1049 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 AL392088.2-201ENST00000637607 285 ntBASIC4.53□□□□□ -1.68
USP29Q9HBJ7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP29Q9HBJ7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 OR4A15-201ENST00000314706 1035 ntBASIC4.52□□□□□ -1.69
USP29Q9HBJ7 RNU6-1122P-201ENST00000384449 107 ntBASIC4.52□□□□□ -1.69
USP29Q9HBJ7 MIR3065-201ENST00000390137 79 ntBASIC4.52□□□□□ -1.69
USP29Q9HBJ7 AC007066.1-201ENST00000392902 381 ntBASIC4.52□□□□□ -1.69
USP29Q9HBJ7 DEFB108C-201ENST00000400154 252 ntBASIC4.52□□□□□ -1.69
USP29Q9HBJ7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 EIF4A1P3-201ENST00000411521 244 ntBASIC4.52□□□□□ -1.69
USP29Q9HBJ7 PGBD4P8-201ENST00000412993 562 ntBASIC4.52□□□□□ -1.69
USP29Q9HBJ7 MTCO1P21-201ENST00000416634 589 ntBASIC4.52□□□□□ -1.69
USP29Q9HBJ7 AL953862.1-201ENST00000423016 168 ntBASIC4.52□□□□□ -1.69
USP29Q9HBJ7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.52□□□□□ -1.69
USP29Q9HBJ7 AC073335.1-201ENST00000427776 363 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms