Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SNRPEP7-201ENST00000438350 220 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AL138878.2-201ENST00000440581 1241 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 HSPE1P28-201ENST00000443139 211 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 RPL23AP81-201ENST00000455252 467 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AP000873.1-201ENST00000463987 400 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 RN7SL810P-201ENST00000493031 276 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC119751.5-201ENST00000514077 770 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 RNA5SP73-201ENST00000516744 108 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 RNU6-678P-201ENST00000516832 109 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 IFITM8P-201ENST00000522529 394 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC007834.2-201ENST00000536310 343 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 OSBPL9P5-201ENST00000542581 171 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC010738.1-201ENST00000604970 987 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC019193.2-201ENST00000610012 634 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 MIR7702-201ENST00000621931 59 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC004009.2-201ENST00000623016 728 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 C2orf27A-204ENST00000623058 969 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC138649.5-201ENST00000637456 137 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 AC087359.1-201ENST00000508335 1740 ntBASIC4.12□□□□□ -1.75
BRF2Q9HAW0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRF2Q9HAW0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AC011266.1-201ENST00000624119 3569 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 SNORD51-201ENST00000384320 80 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 LAP3P1-201ENST00000403648 294 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 MIR1179-201ENST00000408703 91 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AL513174.1-201ENST00000423182 629 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 SETD6P1-201ENST00000444575 317 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 MTCYBP3-201ENST00000445588 1137 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 RNU7-125P-201ENST00000458760 62 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 RN7SL98P-201ENST00000462271 300 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 RPL23AP72-201ENST00000492447 435 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AC078918.1-201ENST00000498515 228 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AK3P4-201ENST00000504283 583 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 RPF2P2-201ENST00000504693 896 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AC111000.3-201ENST00000508057 576 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AL592156.1-201ENST00000508758 304 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 MTCYBP43-201ENST00000513621 740 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AL354984.3-201ENST00000604803 325 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AC090948.1-201ENST00000607464 549 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AP000676.3-201ENST00000623299 569 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 AC040168.1-201ENST00000623594 991 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.11□□□□□ -1.75
BRF2Q9HAW0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRF2Q9HAW0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRF2Q9HAW0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms