Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AL391813.2-201ENST00000609113 322 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 BX664608.1-201ENST00000610519 487 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC078899.5-201ENST00000612475 178 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 C2orf27A-204ENST00000623058 969 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 AC009161.2-201ENST00000624626 138 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 PCAT14-202ENST00000627127 3935 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 CASC19-204ENST00000641001 2055 ntBASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SEC61A2Q9H9S3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 ADAM5-202ENST00000399789 1942 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RPL23AP57-201ENST00000332361 466 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RNU1-85P-201ENST00000364127 164 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-343P-201ENST00000364709 104 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-744P-201ENST00000365557 107 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-730P-201ENST00000383954 104 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 MIR606-201ENST00000384851 96 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 MIR105-1-201ENST00000385222 81 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC078974.1-201ENST00000411597 223 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 PRELID3BP11-201ENST00000414230 479 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC048351.1-201ENST00000420064 602 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RPL7L1P9-201ENST00000431298 745 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 GPM6BP2-201ENST00000432046 144 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RPL23AP30-201ENST00000432419 501 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RPL36AP53-201ENST00000432891 316 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 BRK1P2-201ENST00000442875 223 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 GPM6BP1-201ENST00000446387 144 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AL035090.1-201ENST00000454835 332 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RPS20P32-201ENST00000456044 356 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RPL37P3-201ENST00000456825 293 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-261P-201ENST00000459506 102 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC026410.2-201ENST00000460281 156 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 EIF3KP3-201ENST00000514461 639 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC022360.1-201ENST00000521058 340 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 HMGB1P40-201ENST00000525121 540 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 PSMA2P1-201ENST00000526365 646 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 HSPE1P3-201ENST00000559254 309 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC068714.1-201ENST00000559623 800 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 uc_338.5-201ENST00000611839 155 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC090617.10-201ENST00000624308 134 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC074101.1-201ENST00000637861 241 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AL049780.3-201ENST00000624612 1583 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC092125.1-201ENST00000562568 1995 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC093591.2-201ENST00000565254 3843 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 AC235565.1-201ENST00000456962 1325 ntBASIC4.72□□□□□ -1.65
SEC61A2Q9H9S3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SEC61A2Q9H9S3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.71□□□□□ -1.65
SEC61A2Q9H9S3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.71□□□□□ -1.65
SEC61A2Q9H9S3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 MTND4P27-201ENST00000450813 1354 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 TRIM51GP-201ENST00000534741 1350 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 AC005294.1-201ENST00000355509 281 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 RNU6-1120P-201ENST00000362988 108 ntBASIC4.71□□□□□ -1.66
SEC61A2Q9H9S3 RN7SKP153-201ENST00000365026 316 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms