Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC093719.1-202ENST00000392735 373 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 ATP5F1P4-201ENST00000397288 746 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 RPS12P5-201ENST00000423449 371 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC022022.1-201ENST00000430304 178 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 OR2B8P-201ENST00000432841 938 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AL596276.1-201ENST00000434465 418 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 MTND3P1-201ENST00000441336 220 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 HMGB3P9-201ENST00000441799 583 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AL162151.2-201ENST00000448875 158 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC104306.1-201ENST00000449702 371 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 FGF7P3-201ENST00000454645 303 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 RPL7P22-201ENST00000466005 733 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC091153.1-201ENST00000466297 402 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 RPL21P129-201ENST00000491732 478 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 SAP18P1-201ENST00000512058 390 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 IFITM8P-201ENST00000522529 394 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AP000873.5-201ENST00000533906 236 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 UBE2NP1-201ENST00000545592 458 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC087883.1-201ENST00000551882 391 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC245505.1-201ENST00000556398 224 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 HMGB2P1-201ENST00000591146 634 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC006539.2-201ENST00000601729 572 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AL356055.1-201ENST00000602528 446 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AL606834.2-201ENST00000602954 668 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AF250324.2-201ENST00000608299 610 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC004520.1-201ENST00000608362 1413 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC131235.4-201ENST00000609288 620 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 FAM27D1-201ENST00000612308 341 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC010678.1-201ENST00000614118 713 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 MIR4278-201ENST00000636094 69 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AC099654.10-201ENST00000640395 161 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AP005901.5-201ENST00000545779 1796 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.42□□□□□ -1.7
EBF3Q9H4W6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
EBF3Q9H4W6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 RNA5SP513-201ENST00000364648 118 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 MIR548F1-201ENST00000408667 84 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 RN7SKP33-201ENST00000410942 340 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC016831.2-201ENST00000417179 352 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 RPEP2-201ENST00000432149 701 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 CEACAMP1-201ENST00000434624 1035 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 USP9YP29-201ENST00000445112 563 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 RPL5P32-201ENST00000454085 879 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC096751.1-202ENST00000502691 1067 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 RPL37P25-201ENST00000507308 276 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AL592156.1-201ENST00000508758 304 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 CDC42P4-201ENST00000510507 563 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC008837.2-201ENST00000513076 418 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC108064.1-201ENST00000513791 460 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC099522.1-202ENST00000514718 367 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AF186190.1-201ENST00000517470 480 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 DUXAP2-201ENST00000519198 589 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
EBF3Q9H4W6 POLR2KP1-201ENST00000553226 168 ntBASIC4.41□□□□□ -1.7
EBF3Q9H4W6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms