Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 HMGN2P20-201ENST00000437531 273 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 RN7SL594P-201ENST00000470590 287 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC023050.1-201ENST00000498198 304 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 OR5H3P-201ENST00000502817 919 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC118282.1-201ENST00000506408 765 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC119751.1-201ENST00000513357 765 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 CR383656.14-201ENST00000551951 406 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 DUXAP6-201ENST00000553858 601 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AL121594.4-201ENST00000556211 1196 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 AL606834.2-201ENST00000602954 668 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC006023.1-201ENST00000603944 259 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC018754.1-201ENST00000607486 925 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AL354976.1-201ENST00000613843 387 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 uc_338.9-201ENST00000617424 182 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM4Q9C037 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 SNORA26.7-201ENST00000391288 122 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 AC240504.1-201ENST00000395709 845 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 TRGV6-201ENST00000417928 299 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 AC006960.1-201ENST00000419980 153 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 COX6CP2-201ENST00000444980 225 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 RPS26P21-201ENST00000475397 348 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 MIR4474-201ENST00000579189 78 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 AC006116.10-201ENST00000591836 581 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 AC006557.5-201ENST00000603126 811 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 BNIP3P10-201ENST00000605360 577 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 MTND5P19-201ENST00000424872 1794 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM4Q9C037 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.32□□□□□ -1.88
TRIM4Q9C037 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM4Q9C037 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM4Q9C037 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM4Q9C037 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM4Q9C037 MIR449A-201ENST00000362113 91 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 AL139281.1-201ENST00000422120 335 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 OOSP1P1-201ENST00000423265 274 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 ATP5JP1-201ENST00000431631 322 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM4Q9C037 RPL21P13-201ENST00000488305 481 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 AC080014.1-201ENST00000496877 1201 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 AC010285.3-201ENST00000511668 676 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 AP000926.4-201ENST00000527351 454 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 MIR4672-201ENST00000583126 81 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 AC104763.2-201ENST00000604179 382 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 AL627309.6-201ENST00000606857 840 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 MIR7106-201ENST00000612419 65 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 RMST_5.1-201ENST00000618704 126 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 AC093831.2-201ENST00000624393 3427 ntBASIC3.31□□□□□ -1.88
TRIM4Q9C037 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM4Q9C037 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM4Q9C037 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM4Q9C037 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRIM4Q9C037 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms