Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.19□□□□□ -1.58
RTFDC1Q9BY42 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RTFDC1Q9BY42 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTFDC1Q9BY42 AL672167.1-203ENST00000641299 2975 ntBASIC5.19□□□□□ -1.58
RTFDC1Q9BY42 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RTFDC1Q9BY42 AC097504.1-201ENST00000515103 2415 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 EIF5P1-201ENST00000400019 1231 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC093698.1-201ENST00000423843 571 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AL445584.1-201ENST00000431451 330 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 MTCO3P16-201ENST00000454456 754 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC022795.1-201ENST00000473808 480 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC092045.1-201ENST00000495716 1231 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC087373.1-201ENST00000524920 491 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 OR7K1P-201ENST00000546439 926 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AL352979.3-201ENST00000553515 247 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC135628.1-201ENST00000568867 534 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AL590229.1-201ENST00000603497 542 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC010738.1-201ENST00000604970 987 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC009318.4-201ENST00000620496 486 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC008443.7-201ENST00000622195 246 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC091931.1-201ENST00000623488 728 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC007546.2-201ENST00000623996 360 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC004777.1-201ENST00000624317 287 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC099063.3-201ENST00000642066 185 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 LINC01109-201ENST00000603837 3081 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 Z73965.1-201ENST00000623412 2297 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 AC010300.1-201ENST00000600671 5134 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 PABPC1P7-201ENST00000413177 1513 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 ZNF734P-201ENST00000419494 1534 ntBASIC5.18□□□□□ -1.58
RTFDC1Q9BY42 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 OR10J6P-201ENST00000289731 930 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 OR11H4-201ENST00000315409 1082 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 RPL21P132-201ENST00000331267 462 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 RNU6-500P-201ENST00000362349 107 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 SNORA70E-201ENST00000384492 135 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 MIR449B-201ENST00000384995 97 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AL031577.2-201ENST00000404133 280 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 RN7SKP167-201ENST00000411047 285 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 OR51AB1P-201ENST00000429046 620 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 ARL4AP3-201ENST00000441452 574 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AL500522.2-201ENST00000448562 343 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AL122001.1-201ENST00000457027 370 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC093767.1-201ENST00000504523 156 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 RNA5SP360-201ENST00000516555 118 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 PDCD5P1-201ENST00000543528 309 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 RN7SL435P-201ENST00000584418 282 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 Z98200.1-201ENST00000607298 470 ntBASIC5.17□□□□□ -1.58
RTFDC1Q9BY42 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms