Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 MRPL42P4-201ENST00000453267 443 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 PRELID3BP5-201ENST00000508612 460 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC008885.2-201ENST00000509506 930 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC026407.1-201ENST00000518369 204 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC023632.1-201ENST00000518463 375 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AP000926.4-201ENST00000527351 454 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC139103.1-201ENST00000534696 1030 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC137768.1-201ENST00000549998 553 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC044913.1-201ENST00000557200 430 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 MIR5096-201ENST00000583713 70 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC008507.1-201ENST00000587506 734 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AL020997.3-201ENST00000602843 359 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC021749.1-201ENST00000604322 607 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC016877.3-201ENST00000606778 504 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 RNU4-89P-201ENST00000607443 133 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AP004247.3-201ENST00000608682 624 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 Mico1.1-201ENST00000611698 204 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AL445567.2-201ENST00000618935 498 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AP000346.3-201ENST00000622821 210 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 MFSD8-245ENST00000641743 948 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 AC005183.1-201ENST00000603687 1979 ntBASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC28BQ9BUN5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 RNA5SP383-201ENST00000362934 120 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 RNU6-636P-201ENST00000384598 107 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 CYB5AP4-201ENST00000396692 399 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 TMSB4XP8-201ENST00000402089 135 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 RNU6-575P-201ENST00000411326 105 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 RNA5SP107-201ENST00000411358 122 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 TMSB4XP6-201ENST00000415187 135 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 RPL22P18-201ENST00000417197 377 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 HMGB1P49-201ENST00000418882 569 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC245291.1-201ENST00000419501 328 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 GLRXP1-201ENST00000423261 334 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 TMSB4XP1-201ENST00000424567 135 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 NANOGP2-201ENST00000435391 727 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC022034.3-201ENST00000471393 478 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC006463.2-201ENST00000473326 348 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC104689.1-201ENST00000473356 768 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC021205.2-201ENST00000480069 347 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 RPL5P23-201ENST00000496040 868 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC114967.1-201ENST00000504890 259 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC022695.1-201ENST00000522089 237 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AL442163.2-201ENST00000553912 710 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 TRAV15-201ENST00000556680 249 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AL445423.1-201ENST00000609941 536 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AC006386.1-201ENST00000619436 415 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 AL157770.1-201ENST00000623049 439 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 MIR4278-201ENST00000636094 69 ntBASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC28BQ9BUN5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms