Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 XKRYP3-201ENST00000442113 1116 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 AL162389.1-201ENST00000449233 177 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 AC010627.1-201ENST00000503819 1294 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 PCNAP1-201ENST00000505363 709 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 BNIP3P7-201ENST00000605641 516 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 CYCSP41-201ENST00000616920 296 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.09□□□□□ -1.75
USP47Q96K76 AC010329.2-201ENST00000595195 2737 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
USP47Q96K76 RNU6-146P-201ENST00000384602 108 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 RPS15AP6-201ENST00000420703 385 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 AL139281.1-201ENST00000422120 335 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 AL135938.1-201ENST00000443141 297 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 AC112492.1-201ENST00000449607 712 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 RPL31P50-201ENST00000471002 296 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.09□□□□□ -1.75
USP47Q96K76 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
USP47Q96K76 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.09□□□□□ -1.75
USP47Q96K76 RN7SKP43-201ENST00000516173 320 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 AP003485.2-201ENST00000623636 610 ntBASIC4.09□□□□□ -1.75
USP47Q96K76 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP47Q96K76 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP47Q96K76 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
USP47Q96K76 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP47Q96K76 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP47Q96K76 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP47Q96K76 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP47Q96K76 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP47Q96K76 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP47Q96K76 SNORA18.3-201ENST00000384122 132 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 MIR92A2-201ENST00000385299 75 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 RNU6-244P-201ENST00000391028 104 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 AL356806.1-201ENST00000422524 916 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.08□□□□□ -1.76
USP47Q96K76 UBE2V2P3-201ENST00000433562 437 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 PTP4A1P3-201ENST00000433661 420 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 Z99127.2-201ENST00000441426 334 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.08□□□□□ -1.76
USP47Q96K76 RPL21P41-201ENST00000459863 264 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 AC005912.1-201ENST00000495392 255 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 AC083906.5-201ENST00000503722 328 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.08□□□□□ -1.76
USP47Q96K76 AC024153.1-201ENST00000603103 365 ntBASIC4.08□□□□□ -1.76
USP47Q96K76 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USP47Q96K76 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.08□□□□□ -1.76
USP47Q96K76 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
USP47Q96K76 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
USP47Q96K76 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP47Q96K76 AC114546.3-201ENST00000623582 1734 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USP47Q96K76 RNU6-666P-201ENST00000363499 107 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 MIR421-201ENST00000365696 85 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP47Q96K76 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USP47Q96K76 DHFRP5-201ENST00000406944 564 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 NDUFA5P10-201ENST00000432147 357 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 AL357520.1-201ENST00000441557 453 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 AL627224.1-201ENST00000448334 444 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 NIPA2P5-201ENST00000452282 464 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.07□□□□□ -1.76
USP47Q96K76 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
USP47Q96K76 MTND3P6-201ENST00000485242 339 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 AL035404.1-201ENST00000497982 568 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.07□□□□□ -1.76
USP47Q96K76 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP47Q96K76 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.07□□□□□ -1.76
USP47Q96K76 AC022884.3-201ENST00000579571 248 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 MIR3945-201ENST00000581853 98 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 AC103881.1-201ENST00000603476 538 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 uc_338.9-201ENST00000617424 182 ntBASIC4.07□□□□□ -1.76
USP47Q96K76 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP47Q96K76 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.07□□□□□ -1.76
USP47Q96K76 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.07□□□□□ -1.76
USP47Q96K76 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
USP47Q96K76 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP47Q96K76 AC093010.3-201ENST00000570269 15214 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 SAGE4P-201ENST00000442271 3381 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP47Q96K76 RNU6-984P-201ENST00000363236 109 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 RNU6-152P-201ENST00000384037 107 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 HSPD1P16-201ENST00000402302 394 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 RPL26P37-201ENST00000411983 438 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.06□□□□□ -1.76
USP47Q96K76 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.06□□□□□ -1.76
USP47Q96K76 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.06□□□□□ -1.76
USP47Q96K76 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.06□□□□□ -1.76
USP47Q96K76 ACTR6P1-201ENST00000514311 1104 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 AC103783.1-201ENST00000520506 373 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.06□□□□□ -1.76
USP47Q96K76 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.06□□□□□ -1.76
USP47Q96K76 AC068446.3-201ENST00000555285 382 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.06□□□□□ -1.76
USP47Q96K76 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.06□□□□□ -1.76
USP47Q96K76 PHKBP1-201ENST00000450951 1951 ntBASIC4.06□□□□□ -1.76
USP47Q96K76 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP47Q96K76 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP47Q96K76 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP47Q96K76 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
USP47Q96K76 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms