Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 MIR4284-201ENST00000578924 81 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC005191.1-201ENST00000603950 358 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC115286.1-201ENST00000604298 434 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC012360.2-201ENST00000609349 391 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC005332.10-201ENST00000612725 619 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 MIR6853-201ENST00000619642 74 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 MIR7641-1-201ENST00000627518 61 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL136164.3-201ENST00000624429 3978 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 MTCO1P23-201ENST00000415223 1526 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 OR4G11P-202ENST00000642116 1414 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS50Q96JG6 RNU6-777P-201ENST00000364265 104 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 RNU6-398P-201ENST00000384143 109 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 RNA5SP345-201ENST00000410646 108 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 Y_RNA.619-201ENST00000410951 90 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 RPL7P30-201ENST00000420888 709 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC009480.2-201ENST00000422916 432 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 RPL7P57-201ENST00000423238 740 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC068287.1-201ENST00000430283 295 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 RPS17P8-201ENST00000434525 335 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 MUPP-201ENST00000438111 566 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 ST13P20-201ENST00000447996 1065 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 MEMO1P3-201ENST00000459811 302 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AP000893.1-201ENST00000474462 794 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC026412.2-201ENST00000512270 1075 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 OR4A12P-201ENST00000530847 918 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC141257.3-201ENST00000572906 215 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 MIR4504-201ENST00000577413 92 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC012065.4-201ENST00000602445 679 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC090181.2-201ENST00000602975 672 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC080078.2-201ENST00000603766 501 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC068276.1-201ENST00000605793 379 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC087752.4-201ENST00000605911 462 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC092354.2-201ENST00000607786 514 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS50Q96JG6 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC025048.6-202ENST00000627667 438 ntBASIC4.5□□□□□ -1.69
VPS50Q96JG6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS50Q96JG6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS50Q96JG6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS50Q96JG6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS50Q96JG6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
VPS50Q96JG6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS50Q96JG6 AC008725.1-201ENST00000605123 2263 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 AP002907.1-201ENST00000606361 1430 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 RNU6-501P-201ENST00000364072 100 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms