Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL049610.1-201ENST00000423374 372 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 RPL23AP76-201ENST00000441860 458 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 MTCO2P25-201ENST00000447065 681 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 MTCYBP11-201ENST00000447254 1109 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AL513533.1-201ENST00000453728 415 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 MTCO3P20-201ENST00000454926 688 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 SYPL1P1-201ENST00000473622 768 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC108078.3-201ENST00000502633 489 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC098862.1-201ENST00000504991 413 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 TRAV8-5-201ENST00000537369 341 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 TVP23BP1-201ENST00000557500 617 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AP001269.3-201ENST00000588718 329 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 MTND3P19-201ENST00000603825 345 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 MIR8058-201ENST00000615737 89 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC022509.4-201ENST00000621404 572 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 MIR4278-201ENST00000636094 69 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 CDR1-202ENST00000625883 1485 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AP001148.1-201ENST00000624124 2359 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 RNU6-989P-201ENST00000362756 107 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 RNVU1-6-201ENST00000364688 164 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 RNA5SP189-201ENST00000364920 115 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 Y_RNA.408-201ENST00000383987 102 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 RNU6-398P-201ENST00000384143 109 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 ARF4P3-201ENST00000397387 509 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 EIF5P1-201ENST00000400019 1231 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AL590084.1-201ENST00000407885 387 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 RNA5SP80-201ENST00000410475 111 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 EI24P1-201ENST00000416584 867 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC092447.3-201ENST00000426027 686 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 USP9YP11-201ENST00000427537 717 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 GDI2P1-201ENST00000429312 1336 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 MTND2P5-201ENST00000432656 1006 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 MRPS18BP2-201ENST00000434310 759 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC127537.2-201ENST00000439258 465 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC005410.1-202ENST00000460347 485 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 RN7SL330P-201ENST00000469709 307 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC093767.1-201ENST00000504523 156 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC026726.1-201ENST00000512859 601 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC008837.2-201ENST00000513076 418 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 RNA5SP49-201ENST00000516450 115 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AP000619.3-201ENST00000535634 1127 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.57□□□□□ -1.84
RFT1Q96AA3 MTND3P12-201ENST00000559068 328 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC023813.2-201ENST00000564321 469 ntBASIC3.57□□□□□ -1.84
RFT1Q96AA3 AC099786.3-201ENST00000565735 1410 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms