Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.54□□□□□ -2
USP9XQ93008 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.54□□□□□ -2
USP9XQ93008 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.54□□□□□ -2
USP9XQ93008 LINC00216-201ENST00000623548 1126 ntBASIC2.54□□□□□ -2
USP9XQ93008 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USP9XQ93008 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
USP9XQ93008 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.54□□□□□ -2
USP9XQ93008 Y_RNA.205-201ENST00000364128 113 ntBASIC2.54□□□□□ -2
USP9XQ93008 RNY1P14-201ENST00000384426 108 ntBASIC2.54□□□□□ -2
USP9XQ93008 RANP4-201ENST00000413361 655 ntBASIC2.54□□□□□ -2
USP9XQ93008 AC009963.1-201ENST00000417265 157 ntBASIC2.54□□□□□ -2
USP9XQ93008 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.54□□□□□ -2
USP9XQ93008 AC004866.2-201ENST00000438285 481 ntBASIC2.54□□□□□ -2
USP9XQ93008 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.54□□□□□ -2
USP9XQ93008 SCARNA17.1-201ENST00000516211 143 ntBASIC2.54□□□□□ -2
USP9XQ93008 SCARNA17.2-201ENST00000516334 143 ntBASIC2.54□□□□□ -2
USP9XQ93008 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.54□□□□□ -2
USP9XQ93008 SCARNA17.4-201ENST00000614296 143 ntBASIC2.54□□□□□ -2
USP9XQ93008 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
USP9XQ93008 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
USP9XQ93008 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
USP9XQ93008 AC018555.1-201ENST00000567548 1980 ntBASIC2.53□□□□□ -2
USP9XQ93008 RNU6-321P-201ENST00000410912 106 ntBASIC2.53□□□□□ -2
USP9XQ93008 AC011242.1-201ENST00000433596 1158 ntBASIC2.53□□□□□ -2
USP9XQ93008 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.53□□□□□ -2
USP9XQ93008 MTCO3P16-201ENST00000454456 754 ntBASIC2.53□□□□□ -2
USP9XQ93008 AC107934.2-201ENST00000518653 310 ntBASIC2.53□□□□□ -2
USP9XQ93008 DPRXP4-201ENST00000578053 568 ntBASIC2.53□□□□□ -2
USP9XQ93008 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.53□□□□□ -2
USP9XQ93008 AC104237.2-201ENST00000612456 443 ntBASIC2.53□□□□□ -2
USP9XQ93008 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.53□□□□□ -2
USP9XQ93008 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.53□□□□□ -2
USP9XQ93008 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
USP9XQ93008 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
USP9XQ93008 RNY1-201ENST00000364228 113 ntBASIC2.53□□□□□ -2.01
USP9XQ93008 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC2.53□□□□□ -2.01
USP9XQ93008 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.53□□□□□ -2.01
USP9XQ93008 AC108860.1-201ENST00000484521 383 ntBASIC2.53□□□□□ -2.01
USP9XQ93008 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.53□□□□□ -2.01
USP9XQ93008 AC025445.1-201ENST00000502728 300 ntBASIC2.53□□□□□ -2.01
USP9XQ93008 AC111000.2-201ENST00000507775 550 ntBASIC2.53□□□□□ -2.01
USP9XQ93008 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.53□□□□□ -2.01
USP9XQ93008 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.53□□□□□ -2.01
USP9XQ93008 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.53□□□□□ -2.01
USP9XQ93008 NRBF2P1-201ENST00000587407 859 ntBASIC2.53□□□□□ -2.01
USP9XQ93008 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.53□□□□□ -2.01
USP9XQ93008 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.53□□□□□ -2.01
USP9XQ93008 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
USP9XQ93008 RPS4XP5-202ENST00000449995 1334 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.52□□□□□ -2.01
USP9XQ93008 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.52□□□□□ -2.01
USP9XQ93008 RPL5P30-201ENST00000465511 891 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 AC069499.1-201ENST00000489433 509 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.52□□□□□ -2.01
USP9XQ93008 OR5G4P-201ENST00000525251 760 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.52□□□□□ -2.01
USP9XQ93008 AC010198.2-201ENST00000550612 259 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.52□□□□□ -2.01
USP9XQ93008 AC009063.1-201ENST00000563342 702 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 AC009163.5-201ENST00000575421 637 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 CR381670.1-201ENST00000624291 1693 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
USP9XQ93008 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
USP9XQ93008 RNU1-112P-201ENST00000364401 164 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 RNU6-253P-201ENST00000384730 105 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 AC006989.1-201ENST00000427212 131 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 Z82205.1-201ENST00000428456 297 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 RPS12P18-201ENST00000442381 270 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.52□□□□□ -2.01
USP9XQ93008 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.52□□□□□ -2.01
USP9XQ93008 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
USP9XQ93008 SCGB1D5P-201ENST00000515134 247 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 IGHV3-63-201ENST00000518422 341 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC2.52□□□□□ -2.01
USP9XQ93008 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USP9XQ93008 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.52□□□□□ -2.01
USP9XQ93008 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.52□□□□□ -2.01
USP9XQ93008 AC233309.1-201ENST00000619522 751 ntBASIC2.52□□□□□ -2.01
USP9XQ93008 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP9XQ93008 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
USP9XQ93008 PWAR6-201ENST00000552334 4618 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.51□□□□□ -2.01
USP9XQ93008 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP9XQ93008 AC017007.4-201ENST00000503353 1352 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP9XQ93008 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP9XQ93008 MIR378A-201ENST00000362177 66 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 HMGB3P18-201ENST00000406327 590 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 AC002075.2-201ENST00000425207 252 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 CST9LP2-201ENST00000437612 320 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 AC099560.2-201ENST00000457554 255 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 AC010401.1-201ENST00000463867 348 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.51□□□□□ -2.01
USP9XQ93008 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.51□□□□□ -2.01
USP9XQ93008 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.51□□□□□ -2.01
USP9XQ93008 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.51□□□□□ -2.01
USP9XQ93008 BNIP3P38-201ENST00000601117 544 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 AL359821.1-201ENST00000605519 182 ntBASIC2.51□□□□□ -2.01
USP9XQ93008 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.51□□□□□ -2.01
USP9XQ93008 AC244205.2-202ENST00000635781 342 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms