Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNA5SP52-201ENST00000362448 134 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RNU5E-5P-201ENST00000365379 116 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 MIR649-201ENST00000384843 97 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 U8.14-201ENST00000390843 143 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RNA5SP397-201ENST00000391323 118 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 SDHCP2-201ENST00000398565 501 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RNU2-50P-201ENST00000410494 143 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 HMGN1P14-201ENST00000412459 517 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AL133384.1-201ENST00000412744 351 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 EIF4EP1-201ENST00000422311 642 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RPL37P21-201ENST00000435890 276 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AL450263.2-201ENST00000439400 589 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AL031667.1-201ENST00000440222 725 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RPL23AP16-201ENST00000441715 421 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RPS26P56-201ENST00000444468 240 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 PDSS1P2-201ENST00000449397 678 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RPL7P31-201ENST00000450192 724 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 SNORD42A-201ENST00000459584 64 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RN7SL329P-201ENST00000467740 299 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AP000893.1-201ENST00000474462 794 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC093270.2-201ENST00000486157 792 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC018797.3-201ENST00000513388 1241 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC134698.4-201ENST00000523451 826 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AP002748.2-201ENST00000528671 348 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC022882.1-201ENST00000532142 501 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC009063.1-201ENST00000563342 702 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC087481.2-201ENST00000565492 330 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 BNIP3P23-201ENST00000599655 511 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC087283.1-201ENST00000604029 1074 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 PRELID3BP8-201ENST00000604148 295 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC026368.1-201ENST00000614934 690 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC093591.3-201ENST00000634516 308 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AC000123.3-201ENST00000624029 4975 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 MAPK10-263ENST00000641052 4307 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 MAPK10-304ENST00000641341 3984 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 LINC01109-201ENST00000603837 3081 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 RNA5SP28-201ENST00000363841 119 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AL139095.3-201ENST00000419672 1203 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 RPL36P19-201ENST00000430744 301 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 EEF1A1P1-201ENST00000447052 739 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 NPM1P49-201ENST00000448027 714 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 MTCO1P27-201ENST00000448269 226 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 ABCF2P2-201ENST00000450549 296 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 RNU7-136P-201ENST00000458819 69 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 POU5F1P7-201ENST00000508759 541 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 PAICSP4-201ENST00000517543 1253 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 ZNF705CP-201ENST00000530515 889 ntBASIC4.54□□□□□ -1.68
ATG4AQ8WYN0 AP004247.1-201ENST00000531556 1289 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms