Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC104651.2-201ENST00000447549 528 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 MTND3P16-201ENST00000452205 344 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 RPL7P15-201ENST00000461190 712 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC025674.1-201ENST00000507074 324 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 MRPS35P2-201ENST00000508242 191 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 RN7SKP40-201ENST00000517211 242 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 RN7SKP295-201ENST00000517264 153 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC009902.1-201ENST00000519351 183 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AP004607.2-201ENST00000533949 322 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC006116.3-201ENST00000592968 361 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC245389.1-201ENST00000605141 529 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC133644.2-201ENST00000608142 540 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 Mico1.1-201ENST00000611698 204 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC074101.1-201ENST00000637861 241 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RNU1-35P-201ENST00000362782 153 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-115P-201ENST00000364310 107 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-730P-201ENST00000383954 104 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 SNORD3H-201ENST00000384486 214 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 MIR585-201ENST00000384887 94 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AL645733.1-201ENST00000402250 217 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RNA5SP487-201ENST00000410186 122 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RGS17P1-201ENST00000423358 553 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RPL23AP30-201ENST00000432419 501 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RPS3AP54-201ENST00000435535 734 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 GAPDHP14-201ENST00000450472 937 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC104634.1-201ENST00000452720 462 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RNU7-136P-201ENST00000458819 69 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AL163973.1-201ENST00000484753 577 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-1220P-201ENST00000517126 108 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AP002404.1-201ENST00000532005 451 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC068831.4-201ENST00000556118 109 ntBASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.65□□□□□ -1.5
SHKBP1Q8TBC3 TAB3P1-202ENST00000452645 1634 ntBASIC5.65□□□□□ -1.51
SHKBP1Q8TBC3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHKBP1Q8TBC3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.65□□□□□ -1.51
SHKBP1Q8TBC3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SHKBP1Q8TBC3 OR4F13P-202ENST00000560066 2054 ntBASIC5.65□□□□□ -1.51
SHKBP1Q8TBC3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SHKBP1Q8TBC3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.65□□□□□ -1.51
SHKBP1Q8TBC3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SHKBP1Q8TBC3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 RNA5SP305-201ENST00000362665 119 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 Y_RNA.135-201ENST00000363439 95 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 Y_RNA.257-201ENST00000364596 102 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 RNU6-996P-201ENST00000365438 107 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 MIR514A2-201ENST00000385131 88 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 MIR514A3-201ENST00000385132 88 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 MIR550A3-201ENST00000390735 95 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 U3.36-201ENST00000408418 213 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 GPR143P-201ENST00000434155 205 ntBASIC5.64□□□□□ -1.51
SHKBP1Q8TBC3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms