Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RPS6P12-201ENST00000432491 726 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 AC091179.1-201ENST00000461606 579 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 RWDD4P1-201ENST00000488019 565 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 AC007954.1-201ENST00000554198 494 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 AC012531.5-201ENST00000611375 151 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 AC011978.2-201ENST00000569835 2054 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 SNORA54-201ENST00000384281 123 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 NUP35P1-201ENST00000422734 947 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 TOMM20P4-201ENST00000427861 435 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 TRBV8-2-201ENST00000475637 270 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 RPL36AP21-201ENST00000490372 323 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 CKS1BP2-201ENST00000497342 240 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 AC096586.2-201ENST00000610260 441 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 RMST_8.1-201ENST00000610287 165 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 MIR6733-201ENST00000635723 61 ntBASIC0.92□□□□□ -2.26
SYNE1Q8NF91 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
SYNE1Q8NF91 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 Y_RNA.4-201ENST00000362333 112 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 U3.6-201ENST00000363622 211 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 MIR512-1-201ENST00000384913 84 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RANP7-201ENST00000418085 644 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 ANP32BP2-201ENST00000454525 545 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 IGHV3-63-201ENST00000518422 341 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AL096803.3-201ENST00000609032 532 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RNA5SP42-201ENST00000364278 115 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AL513175.1-201ENST00000431492 780 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RN7SL863P-201ENST00000462370 296 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC110794.1-201ENST00000505816 425 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RNU4ATAC15P-201ENST00000516415 126 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AP002812.4-201ENST00000532139 286 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AL356490.1-201ENST00000623079 479 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 MIR1289-2-201ENST00000408360 111 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 OR51A3P-201ENST00000413596 924 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RPL7P36-201ENST00000444633 681 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AP000893.1-201ENST00000474462 794 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RPS4XP13-201ENST00000483219 789 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RN7SKP285-201ENST00000410137 318 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 OR2B8P-201ENST00000432841 938 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RFPL4AP3-201ENST00000515267 345 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RN7SKP60-201ENST00000516985 239 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC068446.3-201ENST00000555285 382 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC104297.1-201ENST00000393779 870 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 RPL23AP82-202ENST00000427528 469 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 CENPBD1P1-201ENST00000464061 469 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 HIGD1AP13-201ENST00000509878 289 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC008837.1-201ENST00000511513 412 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC025260.1-201ENST00000548858 430 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 BNIP3P8-201ENST00000597863 560 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC108206.1-201ENST00000570186 4159 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 SMC4P1-201ENST00000414479 527 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 SETP5-201ENST00000437270 562 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 HMGB1P3-201ENST00000502802 616 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms