Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 NSRP1P1-201ENST00000444067 1693 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE4Q8N205 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 USP9YP4-201ENST00000424401 1745 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 MIR7-3-201ENST00000384898 110 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 RAB9AP3-201ENST00000412737 573 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 MTCYBP38-201ENST00000417160 1123 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC016831.2-201ENST00000417179 352 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE4Q8N205 MTND1P2-201ENST00000430604 821 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC002542.1-201ENST00000440683 193 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 MTND1P30-201ENST00000441241 901 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 RAB9AP1-201ENST00000449393 573 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 SEPT7P3-201ENST00000455017 621 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AL359385.1-201ENST00000456509 365 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC126182.1-201ENST00000478134 357 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 BNIP3P41-201ENST00000503774 571 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC111193.1-201ENST00000504097 155 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE4Q8N205 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 RNU6-678P-201ENST00000516832 109 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AP003392.2-201ENST00000527269 208 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AP002812.4-201ENST00000532139 286 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC022884.3-201ENST00000579571 248 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 BNIP3P26-201ENST00000600827 554 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC007179.3-201ENST00000604976 235 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC092354.1-201ENST00000606057 376 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AL357080.1-201ENST00000617394 239 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SYNE4Q8N205 MIR6500-201ENST00000622700 86 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC019278.1-201ENST00000623516 479 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE4Q8N205 AC099654.12-201ENST00000639868 649 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE4Q8N205 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNE4Q8N205 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.18□□□□□ -1.58
SYNE4Q8N205 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE4Q8N205 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE4Q8N205 HSPE1P12-201ENST00000412576 301 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 GNG5P5-201ENST00000420444 220 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 RPL7P44-201ENST00000424827 742 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 MED14P1-201ENST00000430517 648 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 USP9YP22-201ENST00000438971 294 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 RPS3AP12-201ENST00000443616 753 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 EPS15P1-201ENST00000448836 336 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 ABCF2P2-201ENST00000450549 296 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC079395.1-201ENST00000510981 262 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 RPS3AP4-201ENST00000555161 764 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 NPM1P47-201ENST00000560843 856 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 TPRKBP2-201ENST00000565969 475 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 SNORA51-201ENST00000606420 132 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AL451049.1-201ENST00000608672 497 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC005858.4-201ENST00000623191 700 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AP003400.5-201ENST00000624827 617 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 SEPT14P19-203ENST00000633205 211 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 AC087821.2-201ENST00000637086 450 ntBASIC5.17□□□□□ -1.58
SYNE4Q8N205 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNE4Q8N205 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNE4Q8N205 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms