Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-1078P-201ENST00000364522 103 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 RNU6-398P-201ENST00000384143 109 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 POLHP1-201ENST00000411806 470 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 RPS6P23-201ENST00000413224 722 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 RPL21P38-201ENST00000418090 167 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 RPL12P34-201ENST00000424532 479 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC137499.1-201ENST00000427602 88 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AL360081.1-201ENST00000428299 555 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AL445928.1-201ENST00000435545 222 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 RPS7P3-201ENST00000443360 580 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC079080.1-201ENST00000479841 822 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AP001025.2-201ENST00000490908 477 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC105384.2-201ENST00000508433 640 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 MTND5P41-201ENST00000517498 206 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 IGKV2-18-201ENST00000522607 343 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AP005639.1-201ENST00000526939 192 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC024405.2-202ENST00000532731 184 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC127381.1-201ENST00000555979 939 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC020916.2-201ENST00000591242 360 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC011921.3-201ENST00000605540 361 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 MIR4679-1-201ENST00000637619 75 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC073869.10-201ENST00000642016 354 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC092724.1-201ENST00000624623 3397 ntBASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS3Q8IXF0 AC006484.1-201ENST00000435086 1884 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AL391684.1-202ENST00000641293 1636 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 Y_RNA.8-201ENST00000362353 102 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 Y_RNA.304-201ENST00000365011 112 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 RNU6-417P-201ENST00000384712 107 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AP003170.5-201ENST00000397185 335 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 OR2AT2P-201ENST00000413438 905 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 BMS1P17-202ENST00000416720 316 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AL590632.1-201ENST00000424289 371 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AC104164.1-201ENST00000460282 590 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 RPS23P6-201ENST00000466136 431 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AC104472.2-201ENST00000469035 601 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AC083829.1-201ENST00000503756 657 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 RNU6-189P-201ENST00000516120 101 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 RNA5SP503-201ENST00000517047 117 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 RNU6-897P-201ENST00000517135 105 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 HIGD1AP5-201ENST00000529959 259 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 MIR4775-201ENST00000581168 75 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 RN7SL544P-201ENST00000617232 284 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 RN7SL763P-201ENST00000620922 284 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 AC069234.4-201ENST00000621276 412 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 MIR4272-201ENST00000635924 64 ntBASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.19□□□□□ -1.42
NPAS3Q8IXF0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms