Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC28Q86X40 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LRRC28Q86X40 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.8□□□□□ -1.96
LRRC28Q86X40 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRRC28Q86X40 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 SNORA11.1-201ENST00000408133 129 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 ATP5C1P1-201ENST00000441945 895 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 AL590639.1-201ENST00000456484 337 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 HMGN2P16-201ENST00000456802 261 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 RPL21P104-201ENST00000464143 478 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 VN1R17P-201ENST00000472048 1090 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 CAB39P1-201ENST00000502277 460 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 AC110794.1-201ENST00000505816 425 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LRRC28Q86X40 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 FAM60CP-201ENST00000591086 664 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 AC078899.3-201ENST00000599065 212 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 CKS1BP3-201ENST00000600888 237 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 AL355816.1-201ENST00000607951 118 ntBASIC2.79□□□□□ -1.96
LRRC28Q86X40 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.79□□□□□ -1.96
LRRC28Q86X40 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC28Q86X40 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 MTND5P3-201ENST00000438536 1800 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 SNORA51.2-201ENST00000364595 132 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 U8.9-201ENST00000365667 134 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 OR52E6-202ENST00000379946 954 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 AC006028.1-201ENST00000438379 402 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 RPL21P2-201ENST00000440049 481 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 AL591503.2-201ENST00000442314 1005 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 BTF3P5-201ENST00000457252 467 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 AP004217.1-201ENST00000480579 346 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 AC021678.1-201ENST00000505195 936 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC28Q86X40 RN7SKP244-201ENST00000516513 307 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 RNU4-18P-201ENST00000516751 149 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC28Q86X40 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 MIR3690-201ENST00000580266 75 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 MIR5195-201ENST00000583555 115 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 AC084373.1-201ENST00000603311 235 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 AL162713.1-201ENST00000604480 262 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 AC073657.2-201ENST00000605661 303 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 AC069234.5-201ENST00000611056 416 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.78□□□□□ -1.96
LRRC28Q86X40 AF117829.1-206ENST00000621883 3802 ntBASIC2.78□□□□□ -1.96
LRRC28Q86X40 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC28Q86X40 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC28Q86X40 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC28Q86X40 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC28Q86X40 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC28Q86X40 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRC28Q86X40 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LRRC28Q86X40 GTF2H2B-203ENST00000508065 1432 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 RNF6P1-201ENST00000444889 1784 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC096656.1-201ENST00000623826 1364 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LRRC28Q86X40 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LRRC28Q86X40 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LRRC28Q86X40 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms