Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AL118558.2-201ENST00000556294 238 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC090751.1-201ENST00000566966 267 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC012409.4-201ENST00000612923 249 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC133104.2-201ENST00000615272 193 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 MIR6886-201ENST00000619864 61 ntBASIC5.15□□□□□ -1.59
ATG4DQ86TL0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4DQ86TL0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC093311.1-201ENST00000506586 2021 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 RN7SKP185-201ENST00000362813 326 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 U3.12-201ENST00000364498 214 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 RNU6-744P-201ENST00000365557 107 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.396-201ENST00000383949 103 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 RNU6-1316P-201ENST00000384242 108 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AL034374.1-201ENST00000406329 351 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AL606923.1-201ENST00000406616 190 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 BX323014.1-201ENST00000412876 237 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AL596448.1-201ENST00000415024 392 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AL356968.1-201ENST00000416622 474 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC079355.1-201ENST00000421770 223 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 SKA2P1-201ENST00000425592 390 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AL161722.2-201ENST00000434731 981 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC064862.4-201ENST00000442180 334 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 RPS27P27-201ENST00000498779 255 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 RN7SKP219-201ENST00000516825 296 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 SNORA70.20-201ENST00000516848 126 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 IGLV3-24-201ENST00000517477 197 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AL356432.3-201ENST00000568952 465 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 SNORD95-201ENST00000579879 68 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC011445.2-201ENST00000599274 173 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 BBIP1P1-201ENST00000602999 279 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC104695.3-201ENST00000604052 296 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC067931.1-201ENST00000624190 671 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 MIR4302-201ENST00000638058 60 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC007842.1-201ENST00000597336 2039 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC119744.1-201ENST00000454746 1715 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 OR4F13P-202ENST00000560066 2054 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4DQ86TL0 AC015799.1-201ENST00000622996 3122 ntBASIC5.14□□□□□ -1.59
ATG4DQ86TL0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 PWAR1-201ENST00000624188 2414 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 LINC02019-201ENST00000608605 2060 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ATG4DQ86TL0 RNA5SP453-201ENST00000362503 119 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 SNORA64.1-201ENST00000362600 132 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 RNU6-343P-201ENST00000364709 104 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 Y_RNA.367-201ENST00000365544 101 ntBASIC5.13□□□□□ -1.59
ATG4DQ86TL0 RN7SKP229-201ENST00000410465 302 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms