Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 AC008725.1-201ENST00000605123 2263 ntBASIC1.9□□□□□ -2.11
CSMD3Q7Z407 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 RNU6-55P-201ENST00000411092 107 ntBASIC1.9□□□□□ -2.11
CSMD3Q7Z407 RNU6-954P-201ENST00000411355 107 ntBASIC1.9□□□□□ -2.11
CSMD3Q7Z407 AC009063.1-201ENST00000563342 702 ntBASIC1.9□□□□□ -2.11
CSMD3Q7Z407 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 AC048351.1-201ENST00000420064 602 ntBASIC1.9□□□□□ -2.11
CSMD3Q7Z407 RPS6P4-201ENST00000494693 758 ntBASIC1.9□□□□□ -2.11
CSMD3Q7Z407 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 UBTFL10-201ENST00000528532 562 ntBASIC1.9□□□□□ -2.11
CSMD3Q7Z407 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC1.9□□□□□ -2.11
CSMD3Q7Z407 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 Z98941.1-201ENST00000407764 100 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 RPL32P35-201ENST00000415214 394 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 DPH3P2-201ENST00000422618 250 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AC108078.3-201ENST00000502633 489 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 RN7SKP82-201ENST00000516786 223 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 OR1AB1P-201ENST00000585564 761 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 Z82195.1-201ENST00000604558 398 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AL356490.1-201ENST00000623079 479 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AC018634.1-201ENST00000437554 401 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 HMGB3P12-201ENST00000438745 556 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 OR9N1P-201ENST00000491296 333 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 OR5H5P-201ENST00000503164 928 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AC123768.4-201ENST00000616244 701 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AL355493.4-201ENST00000618530 292 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 ELL2P4-201ENST00000446870 1376 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AC012020.1-201ENST00000624541 1728 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AC011242.1-201ENST00000433596 1158 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AL591623.2-201ENST00000449978 222 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 MTCO3P16-201ENST00000454456 754 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 SEC11B-201ENST00000518383 499 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 AC015712.3-201ENST00000559380 164 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 MTCO1P7-201ENST00000419523 1542 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.89□□□□□ -2.11
CSMD3Q7Z407 TOPORSLP1-201ENST00000467693 2102 ntBASIC1.89□□□□□ -2.11
CSMD3Q7Z407 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC000403.1-201ENST00000613696 3585 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 RNU6-76P-201ENST00000384060 104 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 MIR181A2-201ENST00000384863 110 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 CACYBPP2-201ENST00000453625 678 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 RPL9P6-201ENST00000492764 598 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 OR4G11P-201ENST00000492842 939 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC008716.1-201ENST00000511084 513 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 OR5AK3P-201ENST00000527486 1297 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 PISRT1-201ENST00000626175 531 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC107081.3-201ENST00000612715 2034 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 HMGB3P11-201ENST00000440127 604 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC091179.1-201ENST00000461606 579 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 RN7SL330P-201ENST00000469709 307 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC027290.2-201ENST00000623210 18662 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 OR2AS1P-201ENST00000427827 319 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC1.88□□□□□ -2.11
CSMD3Q7Z407 RPL23AP31-201ENST00000456160 467 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC093663.2-201ENST00000484625 313 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 AC011602.1-201ENST00000546484 331 ntBASIC1.88□□□□□ -2.11
CSMD3Q7Z407 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms