Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU6-744P-201ENST00000365557 107 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 RNU6-730P-201ENST00000383954 104 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 RNU1-74P-201ENST00000384108 171 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 RNU6-1316P-201ENST00000384242 108 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 MRPL42P2-201ENST00000403169 426 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 RPS4XP9-201ENST00000405151 780 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 USP9YP27-201ENST00000418455 438 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC245054.1-201ENST00000420944 258 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC099336.2-201ENST00000422457 254 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 COX6CP15-201ENST00000426313 211 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC132479.1-201ENST00000449160 144 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 TCEA1P1-201ENST00000449716 880 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 FABP3P2-201ENST00000453169 399 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC099560.2-201ENST00000457554 255 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 OR52A4P-201ENST00000472867 958 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC093267.1-201ENST00000489176 961 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 MTCYBP18-201ENST00000501056 747 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 MRPS33P2-201ENST00000507850 322 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC098799.2-201ENST00000509466 868 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 TXNP6-201ENST00000510190 310 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC046134.1-201ENST00000514454 666 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC100784.1-201ENST00000522790 310 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AK6P1-201ENST00000540219 478 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 GSTP1P1-201ENST00000548078 319 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC025678.1-201ENST00000567861 338 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 FGF7P1-201ENST00000582820 288 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 MIR3936-201ENST00000584304 110 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AL390208.1-201ENST00000605885 644 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AC008945.2-201ENST00000606056 604 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 AL731566.2-201ENST00000618971 317 ntBASIC5.65□□□□□ -1.5
RUFY4Q6ZNE9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RUFY4Q6ZNE9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RUFY4Q6ZNE9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.65□□□□□ -1.51
RUFY4Q6ZNE9 AC138915.3-201ENST00000562908 1389 ntBASIC5.65□□□□□ -1.51
RUFY4Q6ZNE9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RUFY4Q6ZNE9 ERCC6-202ENST00000374127 1782 ntBASIC5.65□□□□□ -1.51
RUFY4Q6ZNE9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RUFY4Q6ZNE9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RUFY4Q6ZNE9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 SAGE4P-201ENST00000442271 3381 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AC008033.1-201ENST00000216407 1162 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 Y_RNA.70-201ENST00000362886 110 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 RNVU1-6-201ENST00000364688 164 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 SNORA66-201ENST00000384792 133 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 RPL12P9-201ENST00000412942 488 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 MTATP6P27-201ENST00000416987 621 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 MTCO1P20-201ENST00000425366 358 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AL161722.2-201ENST00000434731 981 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 CYCSP24-201ENST00000445119 316 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AL136380.1-201ENST00000447970 162 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 RN7SL814P-201ENST00000487715 300 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 RN7SL244P-201ENST00000493405 297 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 RPL30P11-201ENST00000495304 339 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AC010350.1-201ENST00000504908 231 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 STMN1P2-201ENST00000508435 439 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 BNIP3P1-201ENST00000547295 580 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 MIR4330-201ENST00000579077 105 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 RN7SL52P-201ENST00000584271 284 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 AC012507.3-201ENST00000603556 477 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 RN7SL722P-201ENST00000617780 284 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 RN7SL565P-201ENST00000618246 284 ntBASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.64□□□□□ -1.51
RUFY4Q6ZNE9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms