Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RNU6-678P-201ENST00000516832 109 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC135001.1-201ENST00000544546 283 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 OR7K1P-201ENST00000546439 926 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC053481.3-201ENST00000577881 843 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC090616.2-202ENST00000584248 222 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC110741.2-201ENST00000605278 268 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 VIS1.1-201ENST00000610517 203 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 AL603755.1-201ENST00000619504 163 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC007546.2-201ENST00000623996 360 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC38Q502W7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC38Q502W7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 AC018555.1-201ENST00000567548 1980 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC38Q502W7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC38Q502W7 LINC02471-203ENST00000641941 4752 ntBASIC4.56□□□□□ -1.68
CCDC38Q502W7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC38Q502W7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 OR11H5P-202ENST00000641612 1325 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL133412.1-201ENST00000380194 2992 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC38Q502W7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 Y_RNA.18-201ENST00000362461 102 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 RNU6-263P-201ENST00000363811 107 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC38Q502W7 RNU6-837P-201ENST00000391056 108 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL031679.1-201ENST00000400616 525 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL138878.1-201ENST00000405131 347 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 Y_RNA.625-201ENST00000411256 107 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC083875.1-201ENST00000419509 405 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 MTCO2P5-201ENST00000422621 426 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL365203.2-201ENST00000423444 196 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 RPEP2-201ENST00000432149 701 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL049745.1-201ENST00000433953 286 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 SNRPEP7-201ENST00000438350 220 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 GSTA7P-201ENST00000438425 448 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 ELOCP8-201ENST00000439309 332 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 ELOCP15-201ENST00000442090 332 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 EEF1E1P1-201ENST00000446998 430 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 MEMO1P3-201ENST00000459811 302 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 NDUFA5P9-201ENST00000472609 340 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 SYPL1P1-201ENST00000473622 768 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 S100A11P1-201ENST00000477525 312 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 MTCYBP43-201ENST00000513621 740 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC092851.1-201ENST00000535964 478 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 RPL23AP97-201ENST00000568955 471 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 KPNA2P3-201ENST00000584190 848 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC008782.1-201ENST00000603386 430 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC024560.3-201ENST00000608482 349 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL031666.3-201ENST00000609320 1006 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 MIR6798-201ENST00000612887 67 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL357080.1-201ENST00000617394 239 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC078883.4-201ENST00000623218 367 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AP000676.3-201ENST00000623299 569 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC079248.2-201ENST00000623779 326 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC38Q502W7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC38Q502W7 AC087359.1-201ENST00000508335 1740 ntBASIC4.55□□□□□ -1.68
CCDC38Q502W7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC38Q502W7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC38Q502W7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC38Q502W7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 RPL21P132-201ENST00000331267 462 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 Y_RNA.169-201ENST00000363745 96 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC38Q502W7 RNU2-15P-201ENST00000410692 191 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 RPS15AP38-201ENST00000413110 372 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 MTATP6P27-201ENST00000416987 621 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 MTND2P18-201ENST00000419962 1030 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC019178.2-201ENST00000423595 505 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC093698.1-201ENST00000423843 571 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms