Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SUMO2P4-201ENST00000504193 276 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 RNU6-1016P-201ENST00000516689 94 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 RN7SKP99-201ENST00000517028 307 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 AC134698.5-201ENST00000519444 336 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 MIR5186-201ENST00000577504 120 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 HMGB2P1-201ENST00000591146 634 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 Z98751.3-201ENST00000604447 521 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 MTND4LP5-201ENST00000605152 292 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 SNORD58B-201ENST00000607313 66 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 Z82243.1-201ENST00000609432 473 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 CR381572.1-201ENST00000625098 102 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 AC087516.1-201ENST00000561236 2428 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 SDAD1P2-201ENST00000441308 2028 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 AC121333.1-201ENST00000567488 2709 ntBASIC5.6□□□□□ -1.51
RSPO4Q2I0M5 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 U3.2-201ENST00000362981 210 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 Y_RNA.274-201ENST00000364714 101 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 Y_RNA.367-201ENST00000365544 101 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 RNU6-48P-201ENST00000384161 107 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 Y_RNA.518-201ENST00000384552 113 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 RNU6-1140P-201ENST00000410517 106 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 RNU2-14P-201ENST00000411053 191 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 RPSAP35-201ENST00000413753 818 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 RPS20P5-201ENST00000434808 360 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 UBE2V1P5-201ENST00000440070 405 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 Y_RNA.654-201ENST00000497848 106 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AC111193.1-201ENST00000504097 155 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AC096754.1-201ENST00000508904 818 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 RNU4-77P-201ENST00000516692 156 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 TXNP4-201ENST00000575018 310 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AC104662.1-201ENST00000604448 511 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AL008729.2-201ENST00000606393 473 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AL391813.2-201ENST00000609113 322 ntBASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RSPO4Q2I0M5 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.52
RSPO4Q2I0M5 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
RSPO4Q2I0M5 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
RSPO4Q2I0M5 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AP001541.1-201ENST00000623322 1904 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 AC105235.1-201ENST00000623208 1816 ntBASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.58□□□□□ -1.52
RSPO4Q2I0M5 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms