Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.81□□□□□ -1.8
NCBP1Q09161 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.81□□□□□ -1.8
NCBP1Q09161 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.81□□□□□ -1.8
NCBP1Q09161 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.81□□□□□ -1.8
NCBP1Q09161 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.81□□□□□ -1.8
NCBP1Q09161 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.81□□□□□ -1.8
NCBP1Q09161 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.81□□□□□ -1.8
NCBP1Q09161 AC040174.2-201ENST00000602701 465 ntBASIC3.81□□□□□ -1.8
NCBP1Q09161 AC007687.1-201ENST00000602704 304 ntBASIC3.81□□□□□ -1.8
NCBP1Q09161 AL118508.4-201ENST00000624142 1176 ntBASIC3.81□□□□□ -1.8
NCBP1Q09161 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.81□□□□□ -1.8
NCBP1Q09161 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.81□□□□□ -1.8
NCBP1Q09161 FRG1DP-201ENST00000635586 771 ntBASIC3.81□□□□□ -1.8
NCBP1Q09161 AC083865.1-201ENST00000636634 831 ntBASIC3.81□□□□□ -1.8
NCBP1Q09161 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NCBP1Q09161 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NCBP1Q09161 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.8□□□□□ -1.8
NCBP1Q09161 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NCBP1Q09161 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCBP1Q09161 MIR208A-201ENST00000362287 71 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 RNA5SP387-201ENST00000364226 106 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 RNU1-33P-201ENST00000364249 162 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 Y_RNA.333-201ENST00000365274 102 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 MIR490-201ENST00000384865 128 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 SNORD17-201ENST00000390930 237 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 PRRC2CP1-201ENST00000404428 159 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.8□□□□□ -1.8
NCBP1Q09161 TATDN1P1-201ENST00000414123 891 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.8□□□□□ -1.8
NCBP1Q09161 AC005189.1-201ENST00000431286 310 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 PTP4A1P3-201ENST00000433661 420 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 ISCA1P2-201ENST00000438679 421 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.8□□□□□ -1.8
NCBP1Q09161 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.8□□□□□ -1.8
NCBP1Q09161 MRPL35P4-201ENST00000453682 566 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.8□□□□□ -1.8
NCBP1Q09161 RPS20P32-201ENST00000456044 356 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 HMGB3P30-201ENST00000457863 606 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 RN7SL601P-201ENST00000471221 293 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.8□□□□□ -1.8
NCBP1Q09161 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.8□□□□□ -1.8
NCBP1Q09161 PTGES3P3-201ENST00000511479 482 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 AC245166.1-201ENST00000521012 253 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.8□□□□□ -1.8
NCBP1Q09161 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.8□□□□□ -1.8
NCBP1Q09161 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.8□□□□□ -1.8
NCBP1Q09161 AC096577.2-201ENST00000611455 153 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 AL359535.1-201ENST00000612100 1087 ntBASIC3.8□□□□□ -1.8
NCBP1Q09161 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCBP1Q09161 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.8□□□□□ -1.8
NCBP1Q09161 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCBP1Q09161 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCBP1Q09161 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.8□□□□□ -1.8
NCBP1Q09161 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCBP1Q09161 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.79□□□□□ -1.8
NCBP1Q09161 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCBP1Q09161 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NCBP1Q09161 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCBP1Q09161 ELL2P4-201ENST00000446870 1376 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.79□□□□□ -1.8
NCBP1Q09161 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NCBP1Q09161 AL645937.1-201ENST00000641739 1652 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCBP1Q09161 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.79□□□□□ -1.8
NCBP1Q09161 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NCBP1Q09161 RNA5SP267-201ENST00000364893 126 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 RNA5SP167-201ENST00000365461 116 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 OR52E6-202ENST00000379946 954 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.79□□□□□ -1.8
NCBP1Q09161 AL513174.1-201ENST00000423182 629 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 RPF2P1-201ENST00000424137 906 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 RPS3AP12-201ENST00000443616 753 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.79□□□□□ -1.8
NCBP1Q09161 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.79□□□□□ -1.8
NCBP1Q09161 AC126121.1-201ENST00000482313 553 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 SETP14-201ENST00000497538 873 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 OR5H3P-201ENST00000502817 919 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 AC008565.1-201ENST00000509046 885 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.79□□□□□ -1.8
NCBP1Q09161 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.79□□□□□ -1.8
NCBP1Q09161 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.79□□□□□ -1.8
NCBP1Q09161 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.79□□□□□ -1.8
NCBP1Q09161 DUXAP6-201ENST00000553858 601 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 AL442163.2-201ENST00000553912 710 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.79□□□□□ -1.8
NCBP1Q09161 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.79□□□□□ -1.8
NCBP1Q09161 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.79□□□□□ -1.8
NCBP1Q09161 AC110801.1-201ENST00000623590 212 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.79□□□□□ -1.8
NCBP1Q09161 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCBP1Q09161 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
NCBP1Q09161 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCBP1Q09161 AF127577.6-201ENST00000623352 2191 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NCBP1Q09161 AC073346.2-201ENST00000624724 2058 ntBASIC3.79□□□□□ -1.8
NCBP1Q09161 AC138915.3-201ENST00000562908 1389 ntBASIC3.78□□□□□ -1.8
NCBP1Q09161 AC091152.2-201ENST00000591628 2569 ntBASIC3.78□□□□□ -1.8
NCBP1Q09161 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NCBP1Q09161 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCBP1Q09161 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms