Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 OR5AK4P-201ENST00000635912 903 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX6-1P78426 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX6-1P78426 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX6-1P78426 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX6-1P78426 THAP12P4-201ENST00000528321 2266 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NKX6-1P78426 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NKX6-1P78426 AC090229.1-201ENST00000590983 1609 ntBASIC4.53□□□□□ -1.68
NKX6-1P78426 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NKX6-1P78426 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.53□□□□□ -1.68
NKX6-1P78426 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX6-1P78426 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX6-1P78426 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX6-1P78426 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX6-1P78426 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
NKX6-1P78426 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX6-1P78426 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
NKX6-1P78426 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX6-1P78426 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX6-1P78426 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX6-1P78426 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX6-1P78426 RN7SKP153-201ENST00000365026 316 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NKX6-1P78426 U3.20-201ENST00000390909 217 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 RNU6-821P-201ENST00000390995 107 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX6-1P78426 AL356967.1-201ENST00000406305 431 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 RN7SKP235-201ENST00000410662 305 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX6-1P78426 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX6-1P78426 COX6B1P1-201ENST00000415962 213 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 AL353777.1-201ENST00000425552 326 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX6-1P78426 C4BPAP2-201ENST00000428434 478 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX6-1P78426 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX6-1P78426 AC093899.1-201ENST00000457984 376 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 AC245028.2-201ENST00000458673 253 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 snoU109.4-201ENST00000458953 143 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 RPS3AP17-201ENST00000472594 777 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX6-1P78426 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX6-1P78426 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX6-1P78426 RNU6-430P-201ENST00000517078 107 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 MTCO2P4-201ENST00000517968 247 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 AC012400.1-201ENST00000518452 381 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX6-1P78426 OR4R3P-201ENST00000525084 838 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 DEFB108A-201ENST00000530110 222 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX6-1P78426 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX6-1P78426 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX6-1P78426 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX6-1P78426 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX6-1P78426 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NKX6-1P78426 DUXAP4-201ENST00000603046 613 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 AC008814.1-201ENST00000603797 406 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 AC010680.4-201ENST00000605334 543 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX6-1P78426 AC040168.1-201ENST00000623594 991 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX6-1P78426 SEPT14P19-203ENST00000633205 211 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 AC083843.3-201ENST00000623679 2186 ntBASIC4.52□□□□□ -1.69
NKX6-1P78426 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX6-1P78426 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX6-1P78426 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
NKX6-1P78426 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX6-1P78426 AC027287.1-201ENST00000553115 1453 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
NKX6-1P78426 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX6-1P78426 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NKX6-1P78426 GNG5P1-201ENST00000255500 204 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX6-1P78426 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.51□□□□□ -1.69
NKX6-1P78426 MIR1182-201ENST00000408363 97 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX6-1P78426 GJA6P-201ENST00000415117 1042 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX6-1P78426 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX6-1P78426 EI24P4-201ENST00000423683 1078 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.51□□□□□ -1.69
NKX6-1P78426 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX6-1P78426 RPL7AP49-201ENST00000429522 581 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 AL591438.1-201ENST00000433508 581 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 CKS1BP5-201ENST00000434172 273 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 RPL7P11-201ENST00000437586 658 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX6-1P78426 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX6-1P78426 AC114495.1-201ENST00000441274 436 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX6-1P78426 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.51□□□□□ -1.69
NKX6-1P78426 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX6-1P78426 NANOGNBP1-201ENST00000448444 480 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 PPIAP3-201ENST00000450588 505 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 AL353691.1-201ENST00000451332 387 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 AC009963.2-201ENST00000453431 138 ntBASIC4.51□□□□□ -1.69
NKX6-1P78426 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX6-1P78426 AC053481.1-201ENST00000467217 306 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms