Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL133271.1-201ENST00000538229 291 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA1P56159 GSTP1P1-201ENST00000548078 319 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 LSM3P2-201ENST00000551246 273 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA1P56159 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.95□□□□□ -1.62
GFRA1P56159 AC005341.1-201ENST00000571086 708 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 MIR4795-201ENST00000584182 89 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA1P56159 AL121992.2-201ENST00000606262 256 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA1P56159 AC093388.1-201ENST00000609166 430 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 AL031666.3-201ENST00000609320 1006 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 MIR6837-201ENST00000620884 64 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 AC079684.1-201ENST00000621405 437 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 AL161637.1-201ENST00000622380 412 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.95□□□□□ -1.62
GFRA1P56159 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
GFRA1P56159 AL157700.1-201ENST00000561973 1432 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
GFRA1P56159 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GFRA1P56159 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
GFRA1P56159 AC006026.1-201ENST00000444025 1803 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 AL450326.2-201ENST00000421913 1962 ntBASIC4.95□□□□□ -1.62
GFRA1P56159 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 AC027287.1-201ENST00000553115 1453 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 AC018809.2-201ENST00000602436 3823 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AL672167.1-205ENST00000641112 3080 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
GFRA1P56159 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.94□□□□□ -1.62
GFRA1P56159 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 MTCO1P9-201ENST00000505577 1534 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
GFRA1P56159 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
GFRA1P56159 Y_RNA.22-201ENST00000362492 102 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 RNA5SP335-201ENST00000363817 110 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 RNU6-641P-201ENST00000384006 107 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
GFRA1P56159 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
GFRA1P56159 RNU6-332P-201ENST00000391193 108 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AL356432.1-201ENST00000405809 419 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 RN7SKP32-201ENST00000410167 303 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AL133482.1-201ENST00000415988 498 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.94□□□□□ -1.62
GFRA1P56159 BX510359.3-201ENST00000422168 306 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 CHIAP3-201ENST00000423668 1133 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 LYPLA1P1-201ENST00000434514 622 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.94□□□□□ -1.62
GFRA1P56159 RPL35AP22-201ENST00000436855 335 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AC073415.1-201ENST00000449240 153 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AC006480.1-201ENST00000449887 378 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 HMGB3P21-201ENST00000452483 547 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AC083899.1-201ENST00000454465 3819 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 RPL37P6-202ENST00000464216 403 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 RPL5P22-201ENST00000480199 884 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.94□□□□□ -1.62
GFRA1P56159 NIPA2P2-201ENST00000496376 1083 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.94□□□□□ -1.62
GFRA1P56159 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 OR10G5P-201ENST00000532733 358 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.94□□□□□ -1.62
GFRA1P56159 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.94□□□□□ -1.62
GFRA1P56159 AL133153.1-201ENST00000557756 303 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.94□□□□□ -1.62
GFRA1P56159 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.94□□□□□ -1.62
GFRA1P56159 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.94□□□□□ -1.62
GFRA1P56159 SUMO2P15-201ENST00000604285 278 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
GFRA1P56159 AC239868.2-201ENST00000564237 4527 ntBASIC4.94□□□□□ -1.62
GFRA1P56159 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
GFRA1P56159 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
GFRA1P56159 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GFRA1P56159 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
GFRA1P56159 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.94□□□□□ -1.62
GFRA1P56159 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.93□□□□□ -1.62
GFRA1P56159 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
GFRA1P56159 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
GFRA1P56159 AC144833.1-201ENST00000567953 4089 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
GFRA1P56159 AC090971.4-201ENST00000560291 1800 ntBASIC4.93□□□□□ -1.62
GFRA1P56159 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms