Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.35□□□□□ -1.87
LIM2P55344 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.35□□□□□ -1.87
LIM2P55344 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.35□□□□□ -1.87
LIM2P55344 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LIM2P55344 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIM2P55344 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LIM2P55344 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIM2P55344 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
LIM2P55344 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LIM2P55344 RN7SKP44-201ENST00000363602 316 ntBASIC3.34□□□□□ -1.87
LIM2P55344 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LIM2P55344 MIR124-3-201ENST00000384866 87 ntBASIC3.34□□□□□ -1.87
LIM2P55344 MIR184-201ENST00000384962 84 ntBASIC3.34□□□□□ -1.87
LIM2P55344 MTCO1P56-201ENST00000401674 224 ntBASIC3.34□□□□□ -1.87
LIM2P55344 SFR1P1-201ENST00000403720 688 ntBASIC3.34□□□□□ -1.87
LIM2P55344 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LIM2P55344 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.34□□□□□ -1.87
LIM2P55344 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.34□□□□□ -1.87
LIM2P55344 OSTCP5-201ENST00000425293 453 ntBASIC3.34□□□□□ -1.87
LIM2P55344 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.34□□□□□ -1.87
LIM2P55344 YWHAZP8-201ENST00000436935 731 ntBASIC3.34□□□□□ -1.87
LIM2P55344 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.34□□□□□ -1.87
LIM2P55344 SNORA84-201ENST00000459229 133 ntBASIC3.34□□□□□ -1.87
LIM2P55344 RPL6P9-201ENST00000466502 859 ntBASIC3.34□□□□□ -1.87
LIM2P55344 RN7SL594P-201ENST00000470590 287 ntBASIC3.34□□□□□ -1.87
LIM2P55344 AC023598.1-201ENST00000472521 361 ntBASIC3.34□□□□□ -1.87
LIM2P55344 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.34□□□□□ -1.87
LIM2P55344 MTND3P3-201ENST00000505004 126 ntBASIC3.34□□□□□ -1.87
LIM2P55344 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIM2P55344 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.34□□□□□ -1.87
LIM2P55344 AC104057.1-201ENST00000515547 497 ntBASIC3.34□□□□□ -1.87
LIM2P55344 RN7SKP13-201ENST00000515933 244 ntBASIC3.34□□□□□ -1.87
LIM2P55344 SNORA67.7-201ENST00000516664 135 ntBASIC3.34□□□□□ -1.87
LIM2P55344 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.34□□□□□ -1.87
LIM2P55344 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.34□□□□□ -1.87
LIM2P55344 AC087897.1-201ENST00000550134 156 ntBASIC3.34□□□□□ -1.87
LIM2P55344 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.34□□□□□ -1.87
LIM2P55344 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.34□□□□□ -1.87
LIM2P55344 ZNF971P-201ENST00000562068 1249 ntBASIC3.34□□□□□ -1.87
LIM2P55344 AC074051.3-201ENST00000570238 358 ntBASIC3.34□□□□□ -1.87
LIM2P55344 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
LIM2P55344 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.34□□□□□ -1.87
LIM2P55344 AC007566.2-201ENST00000603642 413 ntBASIC3.34□□□□□ -1.87
LIM2P55344 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.34□□□□□ -1.87
LIM2P55344 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.34□□□□□ -1.87
LIM2P55344 AC004943.3-201ENST00000624116 600 ntBASIC3.34□□□□□ -1.87
LIM2P55344 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LIM2P55344 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LIM2P55344 AC111188.2-201ENST00000529697 1387 ntBASIC3.34□□□□□ -1.88
LIM2P55344 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.34□□□□□ -1.88
LIM2P55344 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LIM2P55344 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 FRG1CP-201ENST00000358464 769 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 MTCO3P31-201ENST00000405526 789 ntBASIC3.33□□□□□ -1.88
LIM2P55344 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.33□□□□□ -1.88
LIM2P55344 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 AC096632.1-201ENST00000427395 310 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AL158071.1-201ENST00000430315 461 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.33□□□□□ -1.88
LIM2P55344 AC091286.1-201ENST00000431233 461 ntBASIC3.33□□□□□ -1.88
LIM2P55344 HSPD1P21-201ENST00000436541 245 ntBASIC3.33□□□□□ -1.88
LIM2P55344 RNF2P1-201ENST00000442955 1010 ntBASIC3.33□□□□□ -1.88
LIM2P55344 Z95327.1-201ENST00000446082 482 ntBASIC3.33□□□□□ -1.88
LIM2P55344 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.33□□□□□ -1.88
LIM2P55344 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.33□□□□□ -1.88
LIM2P55344 MTND2P39-201ENST00000457230 764 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AC004801.2-202ENST00000463559 283 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AC012170.1-201ENST00000495139 359 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.33□□□□□ -1.88
LIM2P55344 AC048346.1-201ENST00000510247 144 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.33□□□□□ -1.88
LIM2P55344 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.33□□□□□ -1.88
LIM2P55344 AC016065.2-201ENST00000514530 444 ntBASIC3.33□□□□□ -1.88
LIM2P55344 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 snoZ278.1-201ENST00000517059 112 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.33□□□□□ -1.88
LIM2P55344 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.33□□□□□ -1.88
LIM2P55344 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.33□□□□□ -1.88
LIM2P55344 MIR4504-201ENST00000577413 92 ntBASIC3.33□□□□□ -1.88
LIM2P55344 MIR3158-1-201ENST00000583596 81 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AL020997.3-201ENST00000602843 359 ntBASIC3.33□□□□□ -1.88
LIM2P55344 RMST_8.1-201ENST00000610287 165 ntBASIC3.33□□□□□ -1.88
LIM2P55344 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AL592295.2-201ENST00000612578 206 ntBASIC3.33□□□□□ -1.88
LIM2P55344 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.33□□□□□ -1.88
LIM2P55344 AC006133.1-201ENST00000617106 264 ntBASIC3.33□□□□□ -1.88
LIM2P55344 OR11H5P-202ENST00000641612 1325 ntBASIC3.33□□□□□ -1.88
LIM2P55344 AC068647.1-201ENST00000489539 2265 ntBASIC3.33□□□□□ -1.88
LIM2P55344 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 PABPC1P7-201ENST00000413177 1513 ntBASIC3.33□□□□□ -1.88
LIM2P55344 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIM2P55344 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms