Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RPS20P32-201ENST00000456044 356 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 RNU7-125P-201ENST00000458760 62 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.28□□□□□ -1.72
NR1H2P55055 AC078918.1-201ENST00000498515 228 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 AC146944.2-203ENST00000502493 354 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 MRPS33P2-201ENST00000507850 322 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 AC093281.2-201ENST00000510153 597 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 AC005921.1-201ENST00000510589 286 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 AC139495.1-202ENST00000513164 354 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H2P55055 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H2P55055 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H2P55055 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H2P55055 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H2P55055 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.28□□□□□ -1.72
NR1H2P55055 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.28□□□□□ -1.72
NR1H2P55055 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.28□□□□□ -1.72
NR1H2P55055 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
NR1H2P55055 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.28□□□□□ -1.72
NR1H2P55055 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H2P55055 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H2P55055 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H2P55055 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H2P55055 MIR4999-201ENST00000585029 91 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.28□□□□□ -1.72
NR1H2P55055 SNRPGP15-201ENST00000600149 222 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 AC010738.1-201ENST00000604970 987 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 HMGN2P28-201ENST00000606102 262 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.28□□□□□ -1.72
NR1H2P55055 AC083809.1-201ENST00000615051 472 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.28□□□□□ -1.72
NR1H2P55055 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 AL603755.1-201ENST00000619504 163 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NR1H2P55055 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NR1H2P55055 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
NR1H2P55055 AC244517.1-201ENST00000606030 2086 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H2P55055 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.28□□□□□ -1.72
NR1H2P55055 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NR1H2P55055 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
NR1H2P55055 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NR1H2P55055 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 RNU6-989P-201ENST00000362756 107 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 RNU6-263P-201ENST00000363811 107 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 SNORA7.2-201ENST00000364446 145 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 RNA5SP189-201ENST00000364920 115 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 AL590084.2-201ENST00000401481 382 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 RPS7P15-201ENST00000415804 584 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AL513174.1-201ENST00000423182 629 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 MTND4P20-201ENST00000424125 869 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.27□□□□□ -1.73
NR1H2P55055 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NR1H2P55055 FTH1P6-201ENST00000430768 320 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 RPL23AP25-201ENST00000430973 463 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.27□□□□□ -1.73
NR1H2P55055 SNRPEP7-201ENST00000438350 220 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AURKAPS2-201ENST00000454983 333 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 SNRPGP5-201ENST00000456003 220 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
NR1H2P55055 AC006390.1-201ENST00000508068 283 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.27□□□□□ -1.73
NR1H2P55055 Y_RNA.688-201ENST00000516565 95 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 MTCO1P47-201ENST00000523889 1271 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AC239860.2-201ENST00000525886 270 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AP004242.1-201ENST00000533701 349 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.27□□□□□ -1.73
NR1H2P55055 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
NR1H2P55055 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
NR1H2P55055 UBE2NP1-201ENST00000545592 458 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 CYCSP2-201ENST00000558168 301 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.27□□□□□ -1.73
NR1H2P55055 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.27□□□□□ -1.73
NR1H2P55055 SNORD84-203ENST00000584275 78 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AC025946.2-201ENST00000603398 234 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AC128687.1-201ENST00000605304 619 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 RNU6-88P-201ENST00000606801 100 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AL136981.2-201ENST00000617319 734 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AL357080.1-201ENST00000617394 239 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AL607023.1-201ENST00000620045 248 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AC091905.2-201ENST00000623143 306 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AC040168.1-201ENST00000623594 991 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AC009039.2-201ENST00000624524 529 ntBASIC4.27□□□□□ -1.73
NR1H2P55055 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms