Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AL359265.2-201ENST00000434367 631 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AL138878.2-201ENST00000440581 1241 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXA1P49639 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 OR52J1P-201ENST00000450596 932 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXA1P49639 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 AURKAPS2-201ENST00000454983 333 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 MTCO3P11-201ENST00000455103 774 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 MTCO2P18-201ENST00000457151 658 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 MEMO1P3-201ENST00000459811 302 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AC087879.1-201ENST00000474343 374 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AC004069.2-201ENST00000505438 1114 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 MTND4P2-201ENST00000507767 1203 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AC109458.1-201ENST00000508858 316 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 RNA5SP73-201ENST00000516744 108 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 AC239860.2-201ENST00000525886 270 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 OR6C7P-201ENST00000547875 934 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXA1P49639 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA1P49639 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
HOXA1P49639 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 MIR5047-201ENST00000579212 100 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 MAGOH2P-202ENST00000584384 429 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 AC008507.1-201ENST00000587506 734 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AC025165.5-201ENST00000602802 578 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AL391358.1-201ENST00000605342 190 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AC092354.1-201ENST00000606057 376 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AC103710.4-201ENST00000609301 899 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 MIR486-1-201ENST00000612171 68 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 MIR6862-1-201ENST00000613016 70 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA1P49639 MIR6862-2-201ENST00000614755 70 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 MIR6886-201ENST00000619864 61 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 AC091905.2-201ENST00000623143 306 ntBASIC3.7□□□□□ -1.82
HOXA1P49639 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA1P49639 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA1P49639 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA1P49639 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA1P49639 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA1P49639 AC108467.2-201ENST00000617640 1597 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA1P49639 RNA5SP388-201ENST00000362584 119 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 SNORA71.2-201ENST00000364941 134 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA1P49639 RNU6-723P-201ENST00000383973 107 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 RNU1-44P-201ENST00000384453 163 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 MIR765-201ENST00000390226 114 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HOXA1P49639 ARF4P3-201ENST00000397387 509 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 EIF5P1-201ENST00000400019 1231 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 DHFRP6-201ENST00000401776 268 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 MTCYBP36-201ENST00000404146 440 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 RN7SKP267-201ENST00000410381 285 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA1P49639 UBTFL3-201ENST00000418934 1024 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 RPL7P30-201ENST00000420888 709 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA1P49639 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA1P49639 KCTD10P1-201ENST00000434203 625 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA1P49639 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA1P49639 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA1P49639 OR1H1P-201ENST00000448731 937 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA1P49639 HMGB3P21-201ENST00000452483 547 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AC018638.3-201ENST00000461273 132 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 UBTFL6-201ENST00000477929 1024 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AL049830.2-201ENST00000480072 201 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA1P49639 TMEM251P1-201ENST00000503717 318 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA1P49639 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HOXA1P49639 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA1P49639 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA1P49639 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA1P49639 AC026412.2-201ENST00000512270 1075 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AC006499.2-201ENST00000513470 337 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 RNA5SP143-201ENST00000516936 115 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA1P49639 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HOXA1P49639 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA1P49639 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXA1P49639 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA1P49639 HMGN2P6-201ENST00000551091 273 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA1P49639 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA1P49639 MIR4489-201ENST00000578869 62 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA1P49639 AC103792.1-201ENST00000603591 919 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 BNIP3P11-201ENST00000603878 563 ntBASIC3.69□□□□□ -1.82
HOXA1P49639 AL451086.1-201ENST00000605596 223 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms