Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.65□□□□□ -1.83
SOX3P41225 AC068620.4-201ENST00000636730 1182 ntBASIC3.65□□□□□ -1.83
SOX3P41225 AP002001.2-201ENST00000529025 1469 ntBASIC3.65□□□□□ -1.83
SOX3P41225 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SOX3P41225 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SOX3P41225 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SOX3P41225 IPO8P1-201ENST00000455509 3109 ntBASIC3.64□□□□□ -1.83
SOX3P41225 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.64□□□□□ -1.83
SOX3P41225 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.64□□□□□ -1.83
SOX3P41225 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 RNU6-213P-201ENST00000384051 104 ntBASIC3.64□□□□□ -1.83
SOX3P41225 MIR134-201ENST00000385258 73 ntBASIC3.64□□□□□ -1.83
SOX3P41225 HMGN2P8-201ENST00000391458 268 ntBASIC3.64□□□□□ -1.83
SOX3P41225 RNA5SP80-201ENST00000410475 111 ntBASIC3.64□□□□□ -1.83
SOX3P41225 RPL7AP73-201ENST00000413490 353 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AL136133.1-201ENST00000413694 376 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AL008987.1-201ENST00000415528 237 ntBASIC3.64□□□□□ -1.83
SOX3P41225 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.64□□□□□ -1.83
SOX3P41225 VPS26BP1-201ENST00000417155 755 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AC005005.2-201ENST00000420779 380 ntBASIC3.64□□□□□ -1.83
SOX3P41225 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SOX3P41225 USP9YP11-201ENST00000427537 717 ntBASIC3.64□□□□□ -1.83
SOX3P41225 UBE2V1P1-201ENST00000430836 445 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AC005345.1-201ENST00000431868 217 ntBASIC3.64□□□□□ -1.83
SOX3P41225 FGF7P5-201ENST00000441829 291 ntBASIC3.64□□□□□ -1.83
SOX3P41225 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 RPS26P56-201ENST00000444468 240 ntBASIC3.64□□□□□ -1.83
SOX3P41225 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 MTND1P31-201ENST00000449206 961 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.64□□□□□ -1.83
SOX3P41225 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX3P41225 NECAP1P2-201ENST00000455668 727 ntBASIC3.64□□□□□ -1.83
SOX3P41225 OR9M1P-201ENST00000459641 921 ntBASIC3.64□□□□□ -1.83
SOX3P41225 MTCO2P6-201ENST00000463134 685 ntBASIC3.64□□□□□ -1.83
SOX3P41225 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
SOX3P41225 AC010307.1-201ENST00000467206 836 ntBASIC3.64□□□□□ -1.83
SOX3P41225 GAPDHP36-201ENST00000480688 918 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX3P41225 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 AC005798.1-201ENST00000513715 387 ntBASIC3.64□□□□□ -1.83
SOX3P41225 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX3P41225 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX3P41225 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX3P41225 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX3P41225 ARL2BPP5-201ENST00000523141 481 ntBASIC3.64□□□□□ -1.83
SOX3P41225 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX3P41225 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.64□□□□□ -1.83
SOX3P41225 AC092851.1-201ENST00000535964 478 ntBASIC3.64□□□□□ -1.83
SOX3P41225 YPEL5P3-201ENST00000547227 352 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX3P41225 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.64□□□□□ -1.83
SOX3P41225 MTCYBP27-201ENST00000555160 670 ntBASIC3.64□□□□□ -1.83
SOX3P41225 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX3P41225 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.64□□□□□ -1.83
SOX3P41225 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 AC074051.3-201ENST00000570238 358 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.64□□□□□ -1.83
SOX3P41225 AC015726.1-201ENST00000602353 681 ntBASIC3.64□□□□□ -1.83
SOX3P41225 DUXAP3-201ENST00000603616 594 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.64□□□□□ -1.83
SOX3P41225 AC005332.6-201ENST00000613178 446 ntBASIC3.64□□□□□ -1.83
SOX3P41225 AC099669.2-201ENST00000616549 437 ntBASIC3.64□□□□□ -1.83
SOX3P41225 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX3P41225 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX3P41225 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX3P41225 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX3P41225 MKKS-204ENST00000639674 192 ntBASIC3.64□□□□□ -1.83
SOX3P41225 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SOX3P41225 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.64□□□□□ -1.83
SOX3P41225 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SOX3P41225 AC109315.1-201ENST00000584143 1347 ntBASIC3.64□□□□□ -1.83
SOX3P41225 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SOX3P41225 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SOX3P41225 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SOX3P41225 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SOX3P41225 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
SOX3P41225 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.63□□□□□ -1.83
SOX3P41225 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SOX3P41225 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SOX3P41225 SNORD113-6-201ENST00000363345 75 ntBASIC3.63□□□□□ -1.83
SOX3P41225 RNU6-1279P-201ENST00000383917 103 ntBASIC3.63□□□□□ -1.83
SOX3P41225 Y_RNA.408-201ENST00000383987 102 ntBASIC3.63□□□□□ -1.83
SOX3P41225 RPL32P23-201ENST00000397237 405 ntBASIC3.63□□□□□ -1.83
SOX3P41225 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SOX3P41225 RPL23AP47-201ENST00000408017 460 ntBASIC3.63□□□□□ -1.83
SOX3P41225 RNU2-42P-201ENST00000410697 113 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX3P41225 AC092634.6-201ENST00000418558 192 ntBASIC3.63□□□□□ -1.83
SOX3P41225 RPL36AP36-201ENST00000418616 301 ntBASIC3.63□□□□□ -1.83
SOX3P41225 Z97055.1-201ENST00000419730 712 ntBASIC3.63□□□□□ -1.83
SOX3P41225 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.63□□□□□ -1.83
SOX3P41225 AL138785.1-201ENST00000425821 331 ntBASIC3.63□□□□□ -1.83
SOX3P41225 RPL36P19-201ENST00000430744 301 ntBASIC3.63□□□□□ -1.83
SOX3P41225 ATP5F1P1-201ENST00000433775 569 ntBASIC3.63□□□□□ -1.83
SOX3P41225 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SOX3P41225 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms