Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.2□□□□□ -1.74
HADHAP40939 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HADHAP40939 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.2□□□□□ -1.74
HADHAP40939 AC009712.1-201ENST00000564938 316 ntBASIC4.2□□□□□ -1.74
HADHAP40939 AC013244.3-201ENST00000605614 388 ntBASIC4.2□□□□□ -1.74
HADHAP40939 AC007349.4-201ENST00000608114 532 ntBASIC4.2□□□□□ -1.74
HADHAP40939 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HADHAP40939 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.2□□□□□ -1.74
HADHAP40939 AC006963.1-201ENST00000624003 1052 ntBASIC4.2□□□□□ -1.74
HADHAP40939 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.2□□□□□ -1.74
HADHAP40939 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HADHAP40939 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HADHAP40939 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HADHAP40939 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HADHAP40939 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HADHAP40939 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HADHAP40939 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HADHAP40939 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HADHAP40939 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HADHAP40939 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.19□□□□□ -1.74
HADHAP40939 SNRPEP3-201ENST00000338402 276 ntBASIC4.19□□□□□ -1.74
HADHAP40939 Y_RNA.192-201ENST00000363977 102 ntBASIC4.19□□□□□ -1.74
HADHAP40939 RNU4-28P-201ENST00000364739 141 ntBASIC4.19□□□□□ -1.74
HADHAP40939 Y_RNA.311-201ENST00000365068 96 ntBASIC4.19□□□□□ -1.74
HADHAP40939 SNORA70C-201ENST00000384538 135 ntBASIC4.19□□□□□ -1.74
HADHAP40939 MIR513B-201ENST00000385136 84 ntBASIC4.19□□□□□ -1.74
HADHAP40939 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.19□□□□□ -1.74
HADHAP40939 SNORA3C-201ENST00000408792 125 ntBASIC4.19□□□□□ -1.74
HADHAP40939 RPS3AP25-201ENST00000411660 793 ntBASIC4.19□□□□□ -1.74
HADHAP40939 RPL23AP26-201ENST00000412728 464 ntBASIC4.19□□□□□ -1.74
HADHAP40939 TIMM9P2-201ENST00000419324 266 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.19□□□□□ -1.74
HADHAP40939 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HADHAP40939 AL035410.1-201ENST00000427409 427 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AC006548.1-201ENST00000427470 102 ntBASIC4.19□□□□□ -1.74
HADHAP40939 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.19□□□□□ -1.74
HADHAP40939 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.19□□□□□ -1.74
HADHAP40939 BTF3P10-201ENST00000433415 495 ntBASIC4.19□□□□□ -1.74
HADHAP40939 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HADHAP40939 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.19□□□□□ -1.74
HADHAP40939 RPL39P6-201ENST00000448289 150 ntBASIC4.19□□□□□ -1.74
HADHAP40939 RPL36AP13-201ENST00000457490 317 ntBASIC4.19□□□□□ -1.74
HADHAP40939 RNA5SP246-201ENST00000458909 119 ntBASIC4.19□□□□□ -1.74
HADHAP40939 UQCRHP4-201ENST00000471686 272 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AL136126.1-201ENST00000473603 402 ntBASIC4.19□□□□□ -1.74
HADHAP40939 SYPL1P1-201ENST00000473622 768 ntBASIC4.19□□□□□ -1.74
HADHAP40939 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.19□□□□□ -1.74
HADHAP40939 AC091167.1-201ENST00000492017 396 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.19□□□□□ -1.74
HADHAP40939 AC114981.1-201ENST00000503897 678 ntBASIC4.19□□□□□ -1.74
HADHAP40939 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
HADHAP40939 AC108475.1-201ENST00000507880 950 ntBASIC4.19□□□□□ -1.74
HADHAP40939 MTCO3P44-201ENST00000510977 541 ntBASIC4.19□□□□□ -1.74
HADHAP40939 RN7SKP265-201ENST00000516448 223 ntBASIC4.19□□□□□ -1.74
HADHAP40939 RN7SKP21-201ENST00000516503 220 ntBASIC4.19□□□□□ -1.74
HADHAP40939 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.19□□□□□ -1.74
HADHAP40939 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.19□□□□□ -1.74
HADHAP40939 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.19□□□□□ -1.74
HADHAP40939 HSPE1P3-201ENST00000559254 309 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.19□□□□□ -1.74
HADHAP40939 BNIP3P5-201ENST00000562290 498 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.19□□□□□ -1.74
HADHAP40939 MIR4637-201ENST00000582405 84 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AL669831.4-202ENST00000590817 238 ntBASIC4.19□□□□□ -1.74
HADHAP40939 BNIP3P38-201ENST00000601117 544 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AL161729.3-201ENST00000603533 673 ntBASIC4.19□□□□□ -1.74
HADHAP40939 DUXAP3-201ENST00000603616 594 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AC080013.4-201ENST00000607624 649 ntBASIC4.19□□□□□ -1.74
HADHAP40939 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HADHAP40939 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AC069209.1-201ENST00000619282 651 ntBASIC4.19□□□□□ -1.74
HADHAP40939 CR381572.1-201ENST00000625098 102 ntBASIC4.19□□□□□ -1.74
HADHAP40939 MIR3653-201ENST00000625572 110 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.19□□□□□ -1.74
HADHAP40939 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.19□□□□□ -1.74
HADHAP40939 OR52H1-202ENST00000641796 1061 ntBASIC4.19□□□□□ -1.74
HADHAP40939 AL133383.2-201ENST00000622958 2336 ntBASIC4.19□□□□□ -1.74
HADHAP40939 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.19□□□□□ -1.74
HADHAP40939 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.19□□□□□ -1.74
HADHAP40939 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HADHAP40939 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HADHAP40939 AC005539.1-201ENST00000443768 1479 ntBASIC4.18□□□□□ -1.74
HADHAP40939 NUP58P1-201ENST00000502546 1738 ntBASIC4.18□□□□□ -1.74
HADHAP40939 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HADHAP40939 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.18□□□□□ -1.74
HADHAP40939 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.18□□□□□ -1.74
HADHAP40939 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.18□□□□□ -1.74
HADHAP40939 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HADHAP40939 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.18□□□□□ -1.74
HADHAP40939 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HADHAP40939 MTCO1P23-201ENST00000415223 1526 ntBASIC4.18□□□□□ -1.74
HADHAP40939 MIR383-201ENST00000362257 73 ntBASIC4.18□□□□□ -1.74
HADHAP40939 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HADHAP40939 RNU6-761P-201ENST00000384148 107 ntBASIC4.18□□□□□ -1.74
HADHAP40939 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HADHAP40939 RNU6-1242P-201ENST00000391052 103 ntBASIC4.18□□□□□ -1.74
HADHAP40939 AL450338.1-201ENST00000407987 512 ntBASIC4.18□□□□□ -1.74
HADHAP40939 RNA5SP306-201ENST00000411087 107 ntBASIC4.18□□□□□ -1.74
HADHAP40939 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms