Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC007424.1-203ENST00000554613 687 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC12P31275 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC12P31275 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC12P31275 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC12P31275 MIR4716-201ENST00000579628 84 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC044792.1-201ENST00000593294 196 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 MIR6748-201ENST00000610433 71 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC009233.1-201ENST00000616477 371 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 RN7SL544P-201ENST00000617232 284 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AL355974.3-201ENST00000617383 467 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC233309.1-201ENST00000619522 751 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 RN7SL763P-201ENST00000620922 284 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 CU639417.4-201ENST00000623928 207 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC12P31275 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC12P31275 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HOXC12P31275 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC12P31275 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC12P31275 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC12P31275 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC12P31275 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
HOXC12P31275 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.05□□□□□ -1.6
HOXC12P31275 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 AC006026.1-201ENST00000444025 1803 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HOXC12P31275 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HOXC12P31275 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HOXC12P31275 RPL7P26-201ENST00000333817 754 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HOXC12P31275 RNU5A-8P-201ENST00000364102 114 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 XGY1-201ENST00000381172 446 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 RNU6-74P-201ENST00000384235 107 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 RNU6-278P-201ENST00000390945 109 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 Z97832.1-201ENST00000402490 328 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.05□□□□□ -1.6
HOXC12P31275 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.05□□□□□ -1.6
HOXC12P31275 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.05□□□□□ -1.6
HOXC12P31275 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.05□□□□□ -1.6
HOXC12P31275 CRIP1P1-201ENST00000427567 185 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 EZH2P1-201ENST00000431167 291 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 HMGB3P24-201ENST00000433260 622 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.05□□□□□ -1.6
HOXC12P31275 AC073410.1-201ENST00000435125 589 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 AC108059.3-201ENST00000456388 214 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 SNORD121B-201ENST00000458838 81 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 AC021660.1-201ENST00000465006 554 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 RN7SL329P-201ENST00000467740 299 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 AL139099.1-201ENST00000497398 403 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.05□□□□□ -1.6
HOXC12P31275 TMEM248P1-201ENST00000510579 951 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 AC005798.1-201ENST00000513715 387 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 SNORD60.2-201ENST00000516883 86 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.05□□□□□ -1.6
HOXC12P31275 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.05□□□□□ -1.6
HOXC12P31275 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 COX6CP3-201ENST00000580869 223 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 MIR4512-201ENST00000583257 77 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 GLUD1P4-201ENST00000590914 418 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 AL513327.3-201ENST00000602618 469 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 AC013553.2-201ENST00000604244 589 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 AC091925.2-201ENST00000625059 256 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.05□□□□□ -1.6
HOXC12P31275 AC008079.2-201ENST00000623543 20396 ntBASIC5.05□□□□□ -1.6
HOXC12P31275 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HOXC12P31275 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HOXC12P31275 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC12P31275 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HOXC12P31275 MTND4P23-201ENST00000447723 1363 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 THAP12P4-201ENST00000528321 2266 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC12P31275 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HOXC12P31275 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC12P31275 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.04□□□□□ -1.6
HOXC12P31275 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
HOXC12P31275 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXC12P31275 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC12P31275 RNU6-116P-201ENST00000384042 109 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 MIR19A-201ENST00000384878 82 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 U3.29-201ENST00000391296 212 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HOXC12P31275 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.04□□□□□ -1.6
HOXC12P31275 RPL30P3-201ENST00000424262 333 ntBASIC5.04□□□□□ -1.6
HOXC12P31275 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms