Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MTCO1P7-201ENST00000419523 1542 ntBASIC3.21□□□□□ -1.9
COL4A5P29400 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.21□□□□□ -1.9
COL4A5P29400 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL4A5P29400 MIR592-201ENST00000384959 97 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 RN7SKP192-201ENST00000411291 327 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 YPEL5P1-201ENST00000419731 367 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 RNU7-157P-201ENST00000459600 66 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A5P29400 AC113430.1-201ENST00000506872 718 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 AC008837.1-201ENST00000511513 412 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.2□□□□□ -1.9
COL4A5P29400 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A5P29400 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.2□□□□□ -1.9
COL4A5P29400 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.2□□□□□ -1.9
COL4A5P29400 MTCO1P22-201ENST00000604619 1360 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A5P29400 AL031985.3-201ENST00000565390 2449 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A5P29400 TTC39DP-201ENST00000416781 1688 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 AC004972.1-201ENST00000623934 2209 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 SNORD62.1-201ENST00000362541 86 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 MTCO1P39-201ENST00000426148 480 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 OR2AS1P-201ENST00000427827 319 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A5P29400 RPS4XP6-201ENST00000477670 797 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.2□□□□□ -1.9
COL4A5P29400 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.2□□□□□ -1.9
COL4A5P29400 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
COL4A5P29400 OR10D4P-201ENST00000525892 951 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
COL4A5P29400 ZNF861P-201ENST00000588126 639 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A5P29400 AL392112.1-201ENST00000605115 829 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A5P29400 AC025034.2-201ENST00000623264 286 ntBASIC3.2□□□□□ -1.9
COL4A5P29400 MTCO1P9-201ENST00000505577 1534 ntBASIC3.19□□□□□ -1.9
COL4A5P29400 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.19□□□□□ -1.9
COL4A5P29400 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL4A5P29400 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
COL4A5P29400 RNVU1-3-201ENST00000364313 161 ntBASIC3.19□□□□□ -1.9
COL4A5P29400 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL4A5P29400 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.19□□□□□ -1.9
COL4A5P29400 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.19□□□□□ -1.9
COL4A5P29400 CACYBPP2-201ENST00000453625 678 ntBASIC3.19□□□□□ -1.9
COL4A5P29400 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.19□□□□□ -1.9
COL4A5P29400 RPL23AP31-201ENST00000456160 467 ntBASIC3.19□□□□□ -1.9
COL4A5P29400 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.19□□□□□ -1.9
COL4A5P29400 AL358913.1-201ENST00000554342 121 ntBASIC3.19□□□□□ -1.9
COL4A5P29400 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
COL4A5P29400 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.19□□□□□ -1.9
COL4A5P29400 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.19□□□□□ -1.9
COL4A5P29400 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.19□□□□□ -1.9
COL4A5P29400 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL4A5P29400 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
COL4A5P29400 U3.11-201ENST00000364476 212 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 RNA5SP107-201ENST00000411358 122 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 RHEBP3-201ENST00000411920 351 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 AC234781.4-201ENST00000419384 244 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 AL139415.2-201ENST00000431968 163 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.18□□□□□ -1.9
COL4A5P29400 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 AC092013.1-201ENST00000438795 332 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 RPL7P12-201ENST00000446719 750 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.18□□□□□ -1.9
COL4A5P29400 VN1R48P-201ENST00000448149 1036 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 RPS6P2-201ENST00000454208 705 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 AC004801.2-202ENST00000463559 283 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 OR5AK3P-201ENST00000527486 1297 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.18□□□□□ -1.9
COL4A5P29400 AC025754.2-201ENST00000606491 432 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 LINC01355-201ENST00000566551 5444 ntBASIC3.18□□□□□ -1.9
COL4A5P29400 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
COL4A5P29400 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL4A5P29400 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A5P29400 RNU4-44P-201ENST00000363050 141 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 RPS3AP26-201ENST00000398259 784 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.17□□□□□ -1.9
COL4A5P29400 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.17□□□□□ -1.9
COL4A5P29400 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A5P29400 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
COL4A5P29400 AC105402.2-201ENST00000438503 358 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A5P29400 AC010468.1-201ENST00000461022 817 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AC133134.1-201ENST00000466800 359 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AC105918.1-201ENST00000474399 838 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 KLHL2P1-201ENST00000508691 521 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AC008565.1-201ENST00000509046 885 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AC019227.1-201ENST00000526902 510 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.17□□□□□ -1.9
COL4A5P29400 AC009163.5-201ENST00000575421 637 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.17□□□□□ -1.9
COL4A5P29400 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.17□□□□□ -1.9
COL4A5P29400 AC109315.1-201ENST00000584143 1347 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A5P29400 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A5P29400 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A5P29400 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A5P29400 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms