Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
XRCC1P18887 CCNG2P1-201ENST00000549521 1000 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.55□□□□□ -1.84
XRCC1P18887 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
XRCC1P18887 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.55□□□□□ -1.84
XRCC1P18887 AC092354.2-201ENST00000607786 514 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AC013468.1-201ENST00000608680 598 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
XRCC1P18887 AC022079.2-201ENST00000619739 566 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
XRCC1P18887 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.55□□□□□ -1.84
XRCC1P18887 AC068620.4-201ENST00000636730 1182 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 AC006927.2-201ENST00000639256 389 ntBASIC3.55□□□□□ -1.84
XRCC1P18887 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
XRCC1P18887 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
XRCC1P18887 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
XRCC1P18887 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
XRCC1P18887 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
XRCC1P18887 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
XRCC1P18887 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 AC000367.1-201ENST00000452711 1766 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
XRCC1P18887 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 SNORD9-201ENST00000362566 104 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 RNU6-356P-201ENST00000384140 107 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 MIR16-1-201ENST00000385271 89 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 TMSB4XP8-201ENST00000402089 135 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 MTHFD2P2-201ENST00000407725 247 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.54□□□□□ -1.84
XRCC1P18887 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.54□□□□□ -1.84
XRCC1P18887 OR51A3P-201ENST00000413596 924 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 RPS29P4-201ENST00000414733 161 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 TMSB4XP6-201ENST00000415187 135 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 HMGB3P20-201ENST00000417997 600 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.54□□□□□ -1.84
XRCC1P18887 TMSB4XP1-201ENST00000424567 135 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC013262.1-201ENST00000426710 252 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.54□□□□□ -1.84
XRCC1P18887 AL158071.1-201ENST00000430315 461 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC000041.1-201ENST00000439655 175 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.54□□□□□ -1.84
XRCC1P18887 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.54□□□□□ -1.84
XRCC1P18887 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.54□□□□□ -1.84
XRCC1P18887 BX276092.4-201ENST00000452056 248 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC073387.1-201ENST00000453261 709 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.54□□□□□ -1.84
XRCC1P18887 SNORD108-201ENST00000459332 71 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.54□□□□□ -1.84
XRCC1P18887 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.54□□□□□ -1.84
XRCC1P18887 TMED11P-201ENST00000479478 690 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC026414.1-201ENST00000504046 698 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.54□□□□□ -1.84
XRCC1P18887 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.54□□□□□ -1.84
XRCC1P18887 OR8L1P-201ENST00000534005 955 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC006518.2-201ENST00000542513 940 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.54□□□□□ -1.84
XRCC1P18887 MIR5047-201ENST00000579212 100 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC022069.1-201ENST00000582910 658 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.54□□□□□ -1.84
XRCC1P18887 AC022146.1-201ENST00000595307 847 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.54□□□□□ -1.84
XRCC1P18887 AC007687.1-201ENST00000602704 304 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC016542.1-201ENST00000608259 493 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC019176.2-201ENST00000611579 315 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC069209.1-201ENST00000619282 651 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AL732618.1-201ENST00000623251 301 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 AC244258.1-201ENST00000637553 1071 ntBASIC3.54□□□□□ -1.84
XRCC1P18887 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
XRCC1P18887 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.53□□□□□ -1.84
XRCC1P18887 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 RNA5SP42-201ENST00000364278 115 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 RNA5SP235-201ENST00000365411 114 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
XRCC1P18887 MIR218-2-201ENST00000385006 110 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 PTMAP5-201ENST00000393073 333 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
XRCC1P18887 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.53□□□□□ -1.84
XRCC1P18887 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.53□□□□□ -1.84
XRCC1P18887 AC008280.1-201ENST00000418851 412 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.53□□□□□ -1.84
XRCC1P18887 AL451062.2-201ENST00000427515 271 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 RPS7P2-201ENST00000435134 607 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.53□□□□□ -1.84
XRCC1P18887 Z77249.1-201ENST00000444622 1175 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 RPL29P29-201ENST00000448725 423 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 RNU7-140P-201ENST00000459546 60 ntBASIC3.53□□□□□ -1.84
XRCC1P18887 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.53□□□□□ -1.84
XRCC1P18887 AC034236.1-201ENST00000469891 373 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms