Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC084024.2-201ENST00000503480 791 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4□□□□□ -1.77
PDGFRAP16234 AC005921.1-201ENST00000510589 286 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4□□□□□ -1.77
PDGFRAP16234 RNU1-45P-201ENST00000517191 141 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AC023632.4-201ENST00000517783 191 ntBASIC4□□□□□ -1.77
PDGFRAP16234 SUMO2P20-201ENST00000520803 283 ntBASIC4□□□□□ -1.77
PDGFRAP16234 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4□□□□□ -1.77
PDGFRAP16234 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4□□□□□ -1.77
PDGFRAP16234 AC107016.1-201ENST00000550463 337 ntBASIC4□□□□□ -1.77
PDGFRAP16234 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4□□□□□ -1.77
PDGFRAP16234 AC034105.4-201ENST00000568304 277 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AC107982.3-201ENST00000584957 985 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AC006130.2-201ENST00000586202 326 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AL137849.1-201ENST00000604767 169 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4□□□□□ -1.77
PDGFRAP16234 AC104763.3-201ENST00000613765 618 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AL356863.1-201ENST00000623378 1080 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AC099654.9-201ENST00000637055 678 ntBASIC4□□□□□ -1.77
PDGFRAP16234 AF127577.6-201ENST00000623352 2191 ntBASIC4□□□□□ -1.77
PDGFRAP16234 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4□□□□□ -1.77
PDGFRAP16234 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
PDGFRAP16234 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.99□□□□□ -1.77
PDGFRAP16234 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.99□□□□□ -1.77
PDGFRAP16234 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
PDGFRAP16234 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.99□□□□□ -1.77
PDGFRAP16234 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PDGFRAP16234 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 RNU6-492P-201ENST00000363035 104 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 RNA5SP189-201ENST00000364920 115 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.99□□□□□ -1.77
PDGFRAP16234 U1.1-201ENST00000384101 164 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 RNU6-1300P-201ENST00000391046 108 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 RN7SKP159-201ENST00000410657 292 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.99□□□□□ -1.77
PDGFRAP16234 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.99□□□□□ -1.77
PDGFRAP16234 AC092634.6-201ENST00000418558 192 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 MTCYBP24-201ENST00000420387 1106 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.99□□□□□ -1.77
PDGFRAP16234 GTF2IP7-202ENST00000436677 309 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.99□□□□□ -1.77
PDGFRAP16234 SNORA71B-202ENST00000439232 272 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 HMGB3P6-201ENST00000444896 598 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AC079776.3-201ENST00000450665 370 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 TRBV26-201ENST00000456572 344 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 RN7SL542P-201ENST00000467147 294 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.99□□□□□ -1.77
PDGFRAP16234 AC004069.2-201ENST00000505438 1114 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 MTCYBP37-201ENST00000510642 1133 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.99□□□□□ -1.77
PDGFRAP16234 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.99□□□□□ -1.77
PDGFRAP16234 RNA5SP164-201ENST00000516533 110 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 IGKV2D-36-201ENST00000518643 226 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.99□□□□□ -1.77
PDGFRAP16234 AC021451.1-201ENST00000523498 1129 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 MED28P5-201ENST00000528254 438 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 ZNF705CP-201ENST00000530515 889 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.99□□□□□ -1.77
PDGFRAP16234 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.99□□□□□ -1.77
PDGFRAP16234 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.99□□□□□ -1.77
PDGFRAP16234 MIR1254-2-201ENST00000579553 63 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AC244505.7-201ENST00000599675 272 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 BNIP3P39-201ENST00000601077 554 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AC091057.3-201ENST00000602684 733 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AL451086.1-201ENST00000605596 223 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 BRDTP1-201ENST00000605735 677 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AC144521.1-201ENST00000607148 956 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AL391262.2-201ENST00000622466 494 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 ZNF663P-202ENST00000641770 1131 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PDGFRAP16234 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.99□□□□□ -1.77
PDGFRAP16234 ZNF734P-201ENST00000419494 1534 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 AL133383.2-201ENST00000622958 2336 ntBASIC3.99□□□□□ -1.77
PDGFRAP16234 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDGFRAP16234 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFRAP16234 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFRAP16234 AC130650.2-201ENST00000618736 2403 ntBASIC3.98□□□□□ -1.77
PDGFRAP16234 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFRAP16234 MIR554-201ENST00000384874 96 ntBASIC3.98□□□□□ -1.77
PDGFRAP16234 RNU6-328P-201ENST00000390887 106 ntBASIC3.98□□□□□ -1.77
PDGFRAP16234 SNORD65.1-201ENST00000390889 71 ntBASIC3.98□□□□□ -1.77
PDGFRAP16234 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PDGFRAP16234 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.98□□□□□ -1.77
PDGFRAP16234 AL449283.1-202ENST00000418249 604 ntBASIC3.98□□□□□ -1.77
PDGFRAP16234 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.98□□□□□ -1.77
PDGFRAP16234 RAC1P8-201ENST00000427086 527 ntBASIC3.98□□□□□ -1.77
PDGFRAP16234 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.98□□□□□ -1.77
PDGFRAP16234 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.98□□□□□ -1.77
PDGFRAP16234 CFTRP1-201ENST00000456646 183 ntBASIC3.98□□□□□ -1.77
PDGFRAP16234 SNRPGP3-201ENST00000469405 227 ntBASIC3.98□□□□□ -1.77
PDGFRAP16234 AC010301.1-201ENST00000473936 355 ntBASIC3.98□□□□□ -1.77
PDGFRAP16234 KLRA1P-201ENST00000503499 986 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms