Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL353684.1-201ENST00000622677 1120 ntBASIC4.54□□□□□ -1.68
CFTRP13569 AP000526.1-201ENST00000603308 1388 ntBASIC4.54□□□□□ -1.68
CFTRP13569 AC000123.3-201ENST00000624029 4975 ntBASIC4.53□□□□□ -1.68
CFTRP13569 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CFTRP13569 YPEL5P1-201ENST00000419731 367 ntBASIC4.53□□□□□ -1.68
CFTRP13569 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.53□□□□□ -1.68
CFTRP13569 AL356320.1-201ENST00000429616 163 ntBASIC4.53□□□□□ -1.68
CFTRP13569 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.53□□□□□ -1.68
CFTRP13569 HMGB3P12-201ENST00000438745 556 ntBASIC4.53□□□□□ -1.68
CFTRP13569 RN7SKP43-201ENST00000516173 320 ntBASIC4.53□□□□□ -1.68
CFTRP13569 SNORA64.4-201ENST00000516632 81 ntBASIC4.53□□□□□ -1.68
CFTRP13569 Z82195.1-201ENST00000604558 398 ntBASIC4.53□□□□□ -1.68
CFTRP13569 AC008277.2-201ENST00000605196 797 ntBASIC4.53□□□□□ -1.68
CFTRP13569 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.53□□□□□ -1.68
CFTRP13569 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.53□□□□□ -1.68
CFTRP13569 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CFTRP13569 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
CFTRP13569 RNU4-44P-201ENST00000363050 141 ntBASIC4.52□□□□□ -1.69
CFTRP13569 MIR27B-201ENST00000385129 97 ntBASIC4.52□□□□□ -1.69
CFTRP13569 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.52□□□□□ -1.69
CFTRP13569 SRIP2-201ENST00000428470 166 ntBASIC4.52□□□□□ -1.69
CFTRP13569 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.52□□□□□ -1.69
CFTRP13569 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.52□□□□□ -1.69
CFTRP13569 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.52□□□□□ -1.69
CFTRP13569 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.52□□□□□ -1.69
CFTRP13569 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
CFTRP13569 AL122125.1-201ENST00000616999 600 ntBASIC4.52□□□□□ -1.69
CFTRP13569 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CFTRP13569 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CFTRP13569 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CFTRP13569 OR4G1P-202ENST00000641173 1788 ntBASIC4.51□□□□□ -1.69
CFTRP13569 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CFTRP13569 Z98941.1-201ENST00000407764 100 ntBASIC4.51□□□□□ -1.69
CFTRP13569 AL135786.1-201ENST00000415892 214 ntBASIC4.51□□□□□ -1.69
CFTRP13569 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.51□□□□□ -1.69
CFTRP13569 AC105402.2-201ENST00000438503 358 ntBASIC4.51□□□□□ -1.69
CFTRP13569 AC010928.3-201ENST00000587712 541 ntBASIC4.51□□□□□ -1.69
CFTRP13569 AC241377.1-201ENST00000619797 406 ntBASIC4.51□□□□□ -1.69
CFTRP13569 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.51□□□□□ -1.69
CFTRP13569 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CFTRP13569 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.51□□□□□ -1.69
CFTRP13569 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CFTRP13569 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CFTRP13569 RPS3AP26-201ENST00000398259 784 ntBASIC4.5□□□□□ -1.69
CFTRP13569 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CFTRP13569 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.5□□□□□ -1.69
CFTRP13569 AC245291.1-201ENST00000419501 328 ntBASIC4.5□□□□□ -1.69
CFTRP13569 AC010468.1-201ENST00000461022 817 ntBASIC4.5□□□□□ -1.69
CFTRP13569 AC093663.2-201ENST00000484625 313 ntBASIC4.5□□□□□ -1.69
CFTRP13569 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.5□□□□□ -1.69
CFTRP13569 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CFTRP13569 ATP5F1P5-201ENST00000526403 760 ntBASIC4.5□□□□□ -1.69
CFTRP13569 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.5□□□□□ -1.69
CFTRP13569 AP000919.1-202ENST00000581139 1264 ntBASIC4.5□□□□□ -1.69
CFTRP13569 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.5□□□□□ -1.69
CFTRP13569 AC016717.2-201ENST00000609089 5141 ntBASIC4.5□□□□□ -1.69
CFTRP13569 RNA5SP383-201ENST00000362934 120 ntBASIC4.49□□□□□ -1.69
CFTRP13569 RNU4-26P-201ENST00000410270 107 ntBASIC4.49□□□□□ -1.69
CFTRP13569 OR51A3P-201ENST00000413596 924 ntBASIC4.49□□□□□ -1.69
CFTRP13569 AL591806.2-201ENST00000433122 173 ntBASIC4.49□□□□□ -1.69
CFTRP13569 HMGN2P3-201ENST00000433603 273 ntBASIC4.49□□□□□ -1.69
CFTRP13569 MRPS33P4-201ENST00000434892 317 ntBASIC4.49□□□□□ -1.69
CFTRP13569 HMGN2P5-201ENST00000436882 273 ntBASIC4.49□□□□□ -1.69
CFTRP13569 RPS29P6-201ENST00000438196 145 ntBASIC4.49□□□□□ -1.69
CFTRP13569 OR6K1P-201ENST00000456766 971 ntBASIC4.49□□□□□ -1.69
CFTRP13569 RPL21P41-201ENST00000459863 264 ntBASIC4.49□□□□□ -1.69
CFTRP13569 SEC11B-201ENST00000518383 499 ntBASIC4.49□□□□□ -1.69
CFTRP13569 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.49□□□□□ -1.69
CFTRP13569 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.49□□□□□ -1.69
CFTRP13569 PWAR6-201ENST00000552334 4618 ntBASIC4.49□□□□□ -1.69
CFTRP13569 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.49□□□□□ -1.69
CFTRP13569 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CFTRP13569 RNVU1-3-201ENST00000364313 161 ntBASIC4.49□□□□□ -1.69
CFTRP13569 RNU6-482P-201ENST00000391068 107 ntBASIC4.49□□□□□ -1.69
CFTRP13569 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.49□□□□□ -1.69
CFTRP13569 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.49□□□□□ -1.69
CFTRP13569 RPLP0P7-201ENST00000416050 667 ntBASIC4.49□□□□□ -1.69
CFTRP13569 KLHL2P1-201ENST00000508691 521 ntBASIC4.49□□□□□ -1.69
CFTRP13569 RN7SKP24-201ENST00000515888 284 ntBASIC4.49□□□□□ -1.69
CFTRP13569 Y_RNA.673-201ENST00000516306 88 ntBASIC4.49□□□□□ -1.69
CFTRP13569 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.49□□□□□ -1.69
CFTRP13569 AL391156.1-201ENST00000554965 554 ntBASIC4.49□□□□□ -1.69
CFTRP13569 AC009063.1-201ENST00000563342 702 ntBASIC4.49□□□□□ -1.69
CFTRP13569 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.49□□□□□ -1.69
CFTRP13569 AL392112.1-201ENST00000605115 829 ntBASIC4.49□□□□□ -1.69
CFTRP13569 AL592295.2-201ENST00000612578 206 ntBASIC4.49□□□□□ -1.69
CFTRP13569 AL354950.1-201ENST00000614150 568 ntBASIC4.49□□□□□ -1.69
CFTRP13569 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.49□□□□□ -1.69
CFTRP13569 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CFTRP13569 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CFTRP13569 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CFTRP13569 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CFTRP13569 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.48□□□□□ -1.69
CFTRP13569 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.48□□□□□ -1.69
CFTRP13569 FCF1P1-201ENST00000432690 571 ntBASIC4.48□□□□□ -1.69
CFTRP13569 FAM103A2P-201ENST00000444122 354 ntBASIC4.48□□□□□ -1.69
CFTRP13569 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.48□□□□□ -1.69
CFTRP13569 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.48□□□□□ -1.69
CFTRP13569 AC004801.2-202ENST00000463559 283 ntBASIC4.48□□□□□ -1.69
CFTRP13569 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms