Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.9□□□□□ -1.79
TOP1P11387 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.9□□□□□ -1.79
TOP1P11387 AP003717.3-201ENST00000544832 1180 ntBASIC3.9□□□□□ -1.79
TOP1P11387 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.9□□□□□ -1.79
TOP1P11387 MIR3186-201ENST00000577404 85 ntBASIC3.9□□□□□ -1.79
TOP1P11387 SNRPGP15-201ENST00000600149 222 ntBASIC3.9□□□□□ -1.79
TOP1P11387 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.9□□□□□ -1.79
TOP1P11387 CKS1BP3-201ENST00000600888 237 ntBASIC3.9□□□□□ -1.79
TOP1P11387 AL354976.1-201ENST00000613843 387 ntBASIC3.9□□□□□ -1.79
TOP1P11387 AC110801.1-201ENST00000623590 212 ntBASIC3.9□□□□□ -1.79
TOP1P11387 AC104820.1-201ENST00000624183 307 ntBASIC3.9□□□□□ -1.79
TOP1P11387 AC092184.1-201ENST00000625042 715 ntBASIC3.9□□□□□ -1.79
TOP1P11387 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.9□□□□□ -1.79
TOP1P11387 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TOP1P11387 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TOP1P11387 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOP1P11387 AC116096.1-201ENST00000566804 2314 ntBASIC3.89□□□□□ -1.79
TOP1P11387 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP1P11387 AL512646.1-201ENST00000269395 1077 ntBASIC3.89□□□□□ -1.79
TOP1P11387 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TOP1P11387 U3.19-201ENST00000390893 196 ntBASIC3.89□□□□□ -1.79
TOP1P11387 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOP1P11387 AL589655.1-201ENST00000405398 482 ntBASIC3.89□□□□□ -1.79
TOP1P11387 SNORA11.1-201ENST00000408133 129 ntBASIC3.89□□□□□ -1.79
TOP1P11387 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP1P11387 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.89□□□□□ -1.79
TOP1P11387 RSL24D1P8-201ENST00000434442 492 ntBASIC3.89□□□□□ -1.79
TOP1P11387 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP1P11387 ATP5C1P1-201ENST00000441945 895 ntBASIC3.89□□□□□ -1.79
TOP1P11387 RPS4XP13-201ENST00000483219 789 ntBASIC3.89□□□□□ -1.79
TOP1P11387 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP1P11387 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP1P11387 FABP5P12-201ENST00000515543 389 ntBASIC3.89□□□□□ -1.79
TOP1P11387 MIR2276-201ENST00000516886 89 ntBASIC3.89□□□□□ -1.79
TOP1P11387 RN7SKP116-201ENST00000516902 319 ntBASIC3.89□□□□□ -1.79
TOP1P11387 AC107934.2-201ENST00000518653 310 ntBASIC3.89□□□□□ -1.79
TOP1P11387 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP1P11387 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP1P11387 NOP56P3-201ENST00000549457 385 ntBASIC3.89□□□□□ -1.79
TOP1P11387 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP1P11387 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP1P11387 MIR3690-201ENST00000580266 75 ntBASIC3.89□□□□□ -1.79
TOP1P11387 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.89□□□□□ -1.79
TOP1P11387 AC011492.1-201ENST00000600023 315 ntBASIC3.89□□□□□ -1.79
TOP1P11387 AL162713.1-201ENST00000604480 262 ntBASIC3.89□□□□□ -1.79
TOP1P11387 AC079610.2-201ENST00000604818 690 ntBASIC3.89□□□□□ -1.79
TOP1P11387 CR589904.2-201ENST00000612533 440 ntBASIC3.89□□□□□ -1.79
TOP1P11387 MIR7112-201ENST00000616126 65 ntBASIC3.89□□□□□ -1.79
TOP1P11387 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TOP1P11387 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP1P11387 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
TOP1P11387 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TOP1P11387 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TOP1P11387 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TOP1P11387 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TOP1P11387 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TOP1P11387 TAF9BP1-201ENST00000396646 746 ntBASIC3.88□□□□□ -1.79
TOP1P11387 MIR1250-201ENST00000408098 113 ntBASIC3.88□□□□□ -1.79
TOP1P11387 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.88□□□□□ -1.79
TOP1P11387 AL513174.1-201ENST00000423182 629 ntBASIC3.88□□□□□ -1.79
TOP1P11387 GLRXP1-201ENST00000423261 334 ntBASIC3.88□□□□□ -1.79
TOP1P11387 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.88□□□□□ -1.79
TOP1P11387 HMGB1P12-201ENST00000438594 598 ntBASIC3.88□□□□□ -1.79
TOP1P11387 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.88□□□□□ -1.79
TOP1P11387 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TOP1P11387 RN7SL442P-201ENST00000473804 320 ntBASIC3.88□□□□□ -1.79
TOP1P11387 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
TOP1P11387 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.88□□□□□ -1.79
TOP1P11387 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.88□□□□□ -1.79
TOP1P11387 AC104115.2-201ENST00000523026 687 ntBASIC3.88□□□□□ -1.79
TOP1P11387 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 SERPINE4P-201ENST00000554978 281 ntBASIC3.88□□□□□ -1.79
TOP1P11387 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.88□□□□□ -1.79
TOP1P11387 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.88□□□□□ -1.79
TOP1P11387 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 AC015917.1-201ENST00000579654 510 ntBASIC3.88□□□□□ -1.79
TOP1P11387 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 MIR5195-201ENST00000583555 115 ntBASIC3.88□□□□□ -1.79
TOP1P11387 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.88□□□□□ -1.79
TOP1P11387 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.88□□□□□ -1.79
TOP1P11387 AL021368.1-201ENST00000607490 540 ntBASIC3.88□□□□□ -1.79
TOP1P11387 AC006023.2-201ENST00000609916 167 ntBASIC3.88□□□□□ -1.79
TOP1P11387 AL442067.2-201ENST00000614033 363 ntBASIC3.88□□□□□ -1.79
TOP1P11387 XIST_intron.1-201ENST00000619444 68 ntBASIC3.88□□□□□ -1.79
TOP1P11387 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.88□□□□□ -1.79
TOP1P11387 AL118508.4-201ENST00000624142 1176 ntBASIC3.88□□□□□ -1.79
TOP1P11387 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
TOP1P11387 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
TOP1P11387 AC138915.3-201ENST00000562908 1389 ntBASIC3.88□□□□□ -1.79
TOP1P11387 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.87□□□□□ -1.79
TOP1P11387 AC091152.2-201ENST00000591628 2569 ntBASIC3.87□□□□□ -1.79
TOP1P11387 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.87□□□□□ -1.79
TOP1P11387 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TOP1P11387 AP000567.1-201ENST00000406413 156 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms