Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL359999.1-201ENST00000604513 294 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AL132822.1-201ENST00000617063 513 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 7SK.10-201ENST00000621414 298 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 TPTEP1-208ENST00000636884 213 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 SAMMSON-210ENST00000641260 1308 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 AP001284.1-201ENST00000528393 2118 ntBASIC6.94□□□□□ -1.3
CSB-PGBD3P0DP91 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AP000432.2-201ENST00000624164 2048 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AP005432.1-201ENST00000580891 3485 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RNA5SP391-201ENST00000363456 119 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.145-201ENST00000363527 102 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RNU6-1293P-201ENST00000384077 107 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 SNORD115.1-201ENST00000391109 76 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AL031679.1-201ENST00000400616 525 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RPS16P5-201ENST00000406501 404 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RNU2-50P-201ENST00000410494 143 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RNA5SP251-201ENST00000410614 137 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RPL23AP74-201ENST00000437246 471 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 HMGB3P12-201ENST00000438745 556 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AC079168.1-201ENST00000458741 345 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RN7SL354P-201ENST00000469282 294 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RPL7P19-201ENST00000469948 618 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RNU7-30P-201ENST00000516835 62 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 MIR4504-201ENST00000577413 92 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AC209154.1-201ENST00000582156 337 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 NF1P5-201ENST00000588287 448 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 RNU6-156P-201ENST00000621869 107 ntBASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.93□□□□□ -1.3
CSB-PGBD3P0DP91 AC232271.1-201ENST00000602455 2715 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 RNA5SP505-201ENST00000364748 108 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 RNU6-359P-201ENST00000365466 108 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.381-201ENST00000365666 102 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 GNG5P2-201ENST00000372054 207 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 RNU1-74P-201ENST00000384108 171 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 RNU6-474P-201ENST00000384243 107 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.459-201ENST00000384251 102 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 MIR559-201ENST00000385188 96 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 NUP35P1-201ENST00000422734 947 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC234779.1-201ENST00000425910 285 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 H3F3BP1-201ENST00000440551 403 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC002381.1-201ENST00000447049 280 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC132479.1-201ENST00000449160 144 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AL513533.1-201ENST00000453728 415 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC130509.1-201ENST00000464158 433 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC087879.1-201ENST00000474343 374 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 RPL23AP72-201ENST00000492447 435 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 COX6B1P5-201ENST00000509843 249 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 RNU6-1003P-201ENST00000517099 105 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 NPM1P42-201ENST00000560329 862 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC068790.4-201ENST00000602474 263 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC113139.1-201ENST00000605049 239 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AL133215.3-201ENST00000609801 448 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 MIR7703-201ENST00000620784 77 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms