Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL807761.1-201ENST00000417622 171 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 AC245054.1-201ENST00000420944 258 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.1□□□□□ -1.91
UBCP0CG48 VN1R42P-201ENST00000424651 344 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.1□□□□□ -1.91
UBCP0CG48 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.1□□□□□ -1.91
UBCP0CG48 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.1□□□□□ -1.91
UBCP0CG48 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.1□□□□□ -1.91
UBCP0CG48 RNFT1P2-201ENST00000443064 757 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.1□□□□□ -1.91
UBCP0CG48 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.1□□□□□ -1.91
UBCP0CG48 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.1□□□□□ -1.91
UBCP0CG48 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.1□□□□□ -1.91
UBCP0CG48 FABP5P12-201ENST00000515543 389 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 RNU1-61P-201ENST00000516107 151 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 SNORA70.19-201ENST00000516717 90 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 AC026333.2-201ENST00000542164 106 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.1□□□□□ -1.91
UBCP0CG48 UBE2NP1-201ENST00000545592 458 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.1□□□□□ -1.91
UBCP0CG48 AC008507.1-201ENST00000587506 734 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.1□□□□□ -1.91
UBCP0CG48 MIR6875-201ENST00000617506 72 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.1□□□□□ -1.91
UBCP0CG48 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 AC097372.4-201ENST00000625025 466 ntBASIC3.1□□□□□ -1.91
UBCP0CG48 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBCP0CG48 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.1□□□□□ -1.91
UBCP0CG48 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBCP0CG48 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
UBCP0CG48 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
UBCP0CG48 AL079305.1-201ENST00000623159 3008 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.09□□□□□ -1.91
UBCP0CG48 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
UBCP0CG48 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.09□□□□□ -1.91
UBCP0CG48 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBCP0CG48 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBCP0CG48 RPL7P26-201ENST00000333817 754 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 RPL32P3-201ENST00000359025 275 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 SNORD56.4-201ENST00000363883 71 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 RNA5SP283-201ENST00000365604 119 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.09□□□□□ -1.91
UBCP0CG48 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
UBCP0CG48 NPM1P10-201ENST00000398310 865 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.09□□□□□ -1.91
UBCP0CG48 AC126124.2-201ENST00000413542 321 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 OR4C10P-201ENST00000434991 931 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.09□□□□□ -1.91
UBCP0CG48 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.09□□□□□ -1.91
UBCP0CG48 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.09□□□□□ -1.91
UBCP0CG48 RN7SL132P-201ENST00000478131 296 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 AC114967.1-201ENST00000504890 259 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.09□□□□□ -1.91
UBCP0CG48 HPRT1P1-201ENST00000509498 657 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.09□□□□□ -1.91
UBCP0CG48 RNA5SP380-201ENST00000517190 98 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 IGJP1-201ENST00000522682 475 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.09□□□□□ -1.91
UBCP0CG48 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.09□□□□□ -1.91
UBCP0CG48 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.09□□□□□ -1.91
UBCP0CG48 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.09□□□□□ -1.91
UBCP0CG48 AL109653.1-201ENST00000603091 248 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 VIS1.1-201ENST00000610517 203 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.09□□□□□ -1.91
UBCP0CG48 AC068722.2-201ENST00000618734 544 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 AC006213.5-201ENST00000619673 288 ntBASIC3.09□□□□□ -1.91
UBCP0CG48 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.09□□□□□ -1.91
UBCP0CG48 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
UBCP0CG48 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
UBCP0CG48 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBCP0CG48 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBCP0CG48 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.08□□□□□ -1.92
UBCP0CG48 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBCP0CG48 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 RNA5SP383-201ENST00000362934 120 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 RNU6-761P-201ENST00000384148 107 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBCP0CG48 RN7SKP156-201ENST00000410308 342 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 RNU4-65P-201ENST00000410473 140 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
UBCP0CG48 GTF2IP23-201ENST00000423746 351 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 AL009174.1-201ENST00000426577 416 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 RPP40P1-201ENST00000426762 456 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 FAR1P1-201ENST00000427163 934 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.08□□□□□ -1.92
UBCP0CG48 FTH1P1-201ENST00000437933 532 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.08□□□□□ -1.92
UBCP0CG48 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.08□□□□□ -1.92
UBCP0CG48 AL929288.2-201ENST00000446368 407 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.08□□□□□ -1.92
UBCP0CG48 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBCP0CG48 snoU13.4-201ENST00000458916 104 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBCP0CG48 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBCP0CG48 AC026402.1-201ENST00000513642 170 ntBASIC3.08□□□□□ -1.92
UBCP0CG48 SNORA76.2-201ENST00000517095 137 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms