Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SPTA1P02549 Y_RNA.122-201ENST00000363331 96 ntBASIC2.56□□□□□ -2
SPTA1P02549 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.56□□□□□ -2
SPTA1P02549 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.56□□□□□ -2
SPTA1P02549 MTND2P25-201ENST00000449028 610 ntBASIC2.56□□□□□ -2
SPTA1P02549 AC008280.2-201ENST00000455473 307 ntBASIC2.56□□□□□ -2
SPTA1P02549 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
SPTA1P02549 PRDX3P4-201ENST00000470828 747 ntBASIC2.56□□□□□ -2
SPTA1P02549 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.56□□□□□ -2
SPTA1P02549 MIR449C-201ENST00000516047 92 ntBASIC2.56□□□□□ -2
SPTA1P02549 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
SPTA1P02549 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.56□□□□□ -2
SPTA1P02549 AC092608.2-201ENST00000624427 218 ntBASIC2.56□□□□□ -2
SPTA1P02549 AC138627.1-204ENST00000641894 765 ntBASIC2.56□□□□□ -2
SPTA1P02549 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.55□□□□□ -2
SPTA1P02549 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.55□□□□□ -2
SPTA1P02549 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SPTA1P02549 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SPTA1P02549 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SPTA1P02549 MIR181A2-201ENST00000384863 110 ntBASIC2.55□□□□□ -2
SPTA1P02549 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
SPTA1P02549 MTCO1P52-201ENST00000433928 531 ntBASIC2.55□□□□□ -2
SPTA1P02549 RPL7L1P1-201ENST00000448259 785 ntBASIC2.55□□□□□ -2
SPTA1P02549 AC092436.1-201ENST00000506450 503 ntBASIC2.55□□□□□ -2
SPTA1P02549 RN7SKP219-201ENST00000516825 296 ntBASIC2.55□□□□□ -2
SPTA1P02549 CYP2C60P-201ENST00000566088 139 ntBASIC2.55□□□□□ -2
SPTA1P02549 AC007621.1-201ENST00000604544 437 ntBASIC2.55□□□□□ -2
SPTA1P02549 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.55□□□□□ -2
SPTA1P02549 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.55□□□□□ -2
SPTA1P02549 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.54□□□□□ -2
SPTA1P02549 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.54□□□□□ -2
SPTA1P02549 AC112653.1-201ENST00000443851 386 ntBASIC2.54□□□□□ -2
SPTA1P02549 Z99127.3-201ENST00000448158 395 ntBASIC2.54□□□□□ -2
SPTA1P02549 METTL15P1-201ENST00000481421 1045 ntBASIC2.54□□□□□ -2
SPTA1P02549 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.54□□□□□ -2
SPTA1P02549 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.54□□□□□ -2
SPTA1P02549 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.54□□□□□ -2
SPTA1P02549 WDR61-205ENST00000558459 884 ntTSL 3 BASIC2.54□□□□□ -2
SPTA1P02549 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.54□□□□□ -2
SPTA1P02549 AC009163.5-201ENST00000575421 637 ntBASIC2.54□□□□□ -2
SPTA1P02549 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.54□□□□□ -2
SPTA1P02549 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.54□□□□□ -2
SPTA1P02549 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.54□□□□□ -2
SPTA1P02549 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SPTA1P02549 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SPTA1P02549 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.54□□□□□ -2
SPTA1P02549 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.54□□□□□ -2
SPTA1P02549 SNORA36C-201ENST00000384289 132 ntBASIC2.54□□□□□ -2
SPTA1P02549 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SPTA1P02549 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SPTA1P02549 AL592148.1-201ENST00000413568 445 ntBASIC2.54□□□□□ -2
SPTA1P02549 DPH3P2-201ENST00000422618 250 ntBASIC2.54□□□□□ -2
SPTA1P02549 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.54□□□□□ -2
SPTA1P02549 AL162389.1-201ENST00000449233 177 ntBASIC2.54□□□□□ -2
SPTA1P02549 MRPS31P2-201ENST00000451581 518 ntBASIC2.54□□□□□ -2
SPTA1P02549 RN7SKP210-201ENST00000459176 261 ntBASIC2.54□□□□□ -2
SPTA1P02549 AC005351.1-201ENST00000511152 786 ntBASIC2.54□□□□□ -2
SPTA1P02549 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.54□□□□□ -2
SPTA1P02549 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.54□□□□□ -2
SPTA1P02549 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.54□□□□□ -2
SPTA1P02549 AP000942.3-201ENST00000603702 160 ntBASIC2.54□□□□□ -2
SPTA1P02549 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.54□□□□□ -2
SPTA1P02549 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.54□□□□□ -2
SPTA1P02549 MTND5P24-201ENST00000438892 1767 ntBASIC2.54□□□□□ -2
SPTA1P02549 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.54□□□□□ -2
SPTA1P02549 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.54□□□□□ -2
SPTA1P02549 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SPTA1P02549 SNORA64-201ENST00000384674 134 ntBASIC2.53□□□□□ -2
SPTA1P02549 HMGB1P16-201ENST00000447155 540 ntBASIC2.53□□□□□ -2
SPTA1P02549 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.53□□□□□ -2
SPTA1P02549 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.53□□□□□ -2
SPTA1P02549 AC009101.1-201ENST00000568135 242 ntBASIC2.53□□□□□ -2
SPTA1P02549 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.53□□□□□ -2
SPTA1P02549 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.53□□□□□ -2
SPTA1P02549 OR4G1P-202ENST00000641173 1788 ntBASIC2.53□□□□□ -2
SPTA1P02549 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SPTA1P02549 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.53□□□□□ -2
SPTA1P02549 AC092593.1-201ENST00000515413 1815 ntBASIC2.53□□□□□ -2
SPTA1P02549 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.53□□□□□ -2
SPTA1P02549 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2
SPTA1P02549 RNY1P10-201ENST00000363268 113 ntBASIC2.53□□□□□ -2
SPTA1P02549 RNA5SP31-201ENST00000411144 127 ntBASIC2.53□□□□□ -2
SPTA1P02549 OR2X1P-201ENST00000421144 687 ntBASIC2.53□□□□□ -2
SPTA1P02549 AL356320.1-201ENST00000429616 163 ntBASIC2.53□□□□□ -2
SPTA1P02549 HMGB3P6-201ENST00000444896 598 ntBASIC2.53□□□□□ -2
SPTA1P02549 RPL7P20-201ENST00000520308 745 ntBASIC2.53□□□□□ -2
SPTA1P02549 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.53□□□□□ -2
SPTA1P02549 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.53□□□□□ -2
SPTA1P02549 AC097634.1-201ENST00000604491 2467 ntBASIC2.53□□□□□ -2
SPTA1P02549 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
SPTA1P02549 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.52□□□□□ -2.01
SPTA1P02549 B3GNT2P1-201ENST00000434960 952 ntBASIC2.52□□□□□ -2.01
SPTA1P02549 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.52□□□□□ -2.01
SPTA1P02549 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.52□□□□□ -2.01
SPTA1P02549 RPL23AP42-201ENST00000471152 471 ntBASIC2.52□□□□□ -2.01
SPTA1P02549 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.52□□□□□ -2.01
SPTA1P02549 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.52□□□□□ -2.01
SPTA1P02549 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.52□□□□□ -2.01
SPTA1P02549 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.52□□□□□ -2.01
SPTA1P02549 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms