Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL356057.3-201ENST00000402607 340 ntBASIC3.38□□□□□ -1.87
COL1A1P02452 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL1A1P02452 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.38□□□□□ -1.87
COL1A1P02452 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.38□□□□□ -1.87
COL1A1P02452 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.38□□□□□ -1.87
COL1A1P02452 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.38□□□□□ -1.87
COL1A1P02452 AL513328.1-201ENST00000446460 224 ntBASIC3.38□□□□□ -1.87
COL1A1P02452 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
COL1A1P02452 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.38□□□□□ -1.87
COL1A1P02452 OR4C2P-201ENST00000530855 1064 ntBASIC3.38□□□□□ -1.87
COL1A1P02452 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.38□□□□□ -1.87
COL1A1P02452 AP004607.9-201ENST00000618202 316 ntBASIC3.38□□□□□ -1.87
COL1A1P02452 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
COL1A1P02452 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
COL1A1P02452 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.38□□□□□ -1.87
COL1A1P02452 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.38□□□□□ -1.87
COL1A1P02452 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL1A1P02452 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.37□□□□□ -1.87
COL1A1P02452 AC107021.2-201ENST00000567714 2095 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 AC021755.1-201ENST00000559747 1447 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL1A1P02452 MIR196B-201ENST00000384852 84 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 RSL24D1P4-201ENST00000400938 484 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 AC009302.1-201ENST00000417147 390 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.37□□□□□ -1.87
COL1A1P02452 RPL21P112-201ENST00000434403 463 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.37□□□□□ -1.87
COL1A1P02452 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.37□□□□□ -1.87
COL1A1P02452 RPS20P22-201ENST00000473700 357 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.37□□□□□ -1.87
COL1A1P02452 HSPE1P6-201ENST00000479457 291 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.37□□□□□ -1.87
COL1A1P02452 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.37□□□□□ -1.87
COL1A1P02452 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.37□□□□□ -1.87
COL1A1P02452 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.37□□□□□ -1.87
COL1A1P02452 AC234778.2-201ENST00000566241 354 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 AC243829.7-201ENST00000633081 225 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL1A1P02452 AL353743.4-201ENST00000422653 1547 ntBASIC3.37□□□□□ -1.87
COL1A1P02452 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
COL1A1P02452 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
COL1A1P02452 RNU1-35P-201ENST00000362782 153 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 AL356057.1-202ENST00000402263 756 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 NCSTNP1-201ENST00000406229 144 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.36□□□□□ -1.87
COL1A1P02452 MRPS33P4-201ENST00000434892 317 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.36□□□□□ -1.87
COL1A1P02452 RPS29P6-201ENST00000438196 145 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 HMGB1P18-201ENST00000438801 619 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 AP000936.2-201ENST00000447151 681 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 AP002884.2-201ENST00000471647 395 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL1A1P02452 AC006445.2-201ENST00000510061 472 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 RN7SKP43-201ENST00000516173 320 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.36□□□□□ -1.87
COL1A1P02452 ATP5F1P7-201ENST00000567330 760 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.36□□□□□ -1.87
COL1A1P02452 AC004832.5-201ENST00000608677 401 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 AL590808.1-201ENST00000618696 141 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
COL1A1P02452 AC006111.3-201ENST00000622137 383 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.36□□□□□ -1.87
COL1A1P02452 AC046144.1-201ENST00000478559 1853 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL1A1P02452 AC009313.2-201ENST00000417893 1941 ntBASIC3.36□□□□□ -1.87
COL1A1P02452 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.36□□□□□ -1.87
COL1A1P02452 IPMKP1-201ENST00000425988 855 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 HSPE1P22-201ENST00000456856 327 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.35□□□□□ -1.87
COL1A1P02452 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.35□□□□□ -1.87
COL1A1P02452 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL1A1P02452 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL1A1P02452 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL1A1P02452 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL1A1P02452 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.35□□□□□ -1.87
COL1A1P02452 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.35□□□□□ -1.87
COL1A1P02452 AC092593.1-201ENST00000515413 1815 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 AL139039.1-201ENST00000401900 692 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 MIR1183-201ENST00000408856 89 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL1A1P02452 RPS15AP6-201ENST00000420703 385 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.35□□□□□ -1.87
COL1A1P02452 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.35□□□□□ -1.87
COL1A1P02452 TRBV12-1-201ENST00000479785 344 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.35□□□□□ -1.87
COL1A1P02452 KCTD9P5-201ENST00000504141 1170 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.35□□□□□ -1.87
COL1A1P02452 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.35□□□□□ -1.87
COL1A1P02452 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL1A1P02452 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.35□□□□□ -1.87
COL1A1P02452 AC106734.1-201ENST00000568646 663 ntBASIC3.35□□□□□ -1.87
COL1A1P02452 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.35□□□□□ -1.87
COL1A1P02452 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.35□□□□□ -1.87
COL1A1P02452 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.35□□□□□ -1.87
COL1A1P02452 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.35□□□□□ -1.87
COL1A1P02452 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.34□□□□□ -1.87
COL1A1P02452 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL1A1P02452 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms