Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MBD4O95243 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MBD4O95243 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MBD4O95243 NACA3P-201ENST00000359690 648 ntBASIC4.59□□□□□ -1.67
MBD4O95243 RNVU1-3-201ENST00000364313 161 ntBASIC4.59□□□□□ -1.67
MBD4O95243 SNORA72.3-201ENST00000365074 132 ntBASIC4.59□□□□□ -1.67
MBD4O95243 RHOT1P2-201ENST00000366423 333 ntBASIC4.59□□□□□ -1.67
MBD4O95243 RNU6-413P-201ENST00000384115 107 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AL590704.1-201ENST00000402856 794 ntBASIC4.59□□□□□ -1.67
MBD4O95243 RNA5SP39-201ENST00000411245 120 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.59□□□□□ -1.67
MBD4O95243 AL139247.1-201ENST00000422768 325 ntBASIC4.59□□□□□ -1.67
MBD4O95243 RPL7P44-201ENST00000424827 742 ntBASIC4.59□□□□□ -1.67
MBD4O95243 MOB1AP1-201ENST00000430903 535 ntBASIC4.59□□□□□ -1.67
MBD4O95243 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.59□□□□□ -1.67
MBD4O95243 NOTCH2P1-201ENST00000443481 624 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AP004289.2-201ENST00000444413 1457 ntBASIC4.59□□□□□ -1.67
MBD4O95243 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
MBD4O95243 PTGES3P5-201ENST00000455109 434 ntBASIC4.59□□□□□ -1.67
MBD4O95243 SNORA84-201ENST00000459229 133 ntBASIC4.59□□□□□ -1.67
MBD4O95243 RPL5P23-201ENST00000496040 868 ntBASIC4.59□□□□□ -1.67
MBD4O95243 OR5H5P-201ENST00000503164 928 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.59□□□□□ -1.67
MBD4O95243 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MBD4O95243 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.59□□□□□ -1.67
MBD4O95243 AC026726.1-201ENST00000512859 601 ntBASIC4.59□□□□□ -1.67
MBD4O95243 RNU6-1225P-201ENST00000516336 65 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.59□□□□□ -1.67
MBD4O95243 AP003385.6-201ENST00000531603 374 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.59□□□□□ -1.67
MBD4O95243 AC090502.2-201ENST00000549267 280 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AC008127.2-201ENST00000549925 1075 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.59□□□□□ -1.67
MBD4O95243 AL389895.1-201ENST00000554127 252 ntBASIC4.59□□□□□ -1.67
MBD4O95243 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.59□□□□□ -1.67
MBD4O95243 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.59□□□□□ -1.67
MBD4O95243 AC090616.5-202ENST00000582111 297 ntBASIC4.59□□□□□ -1.67
MBD4O95243 IGHV3-29-201ENST00000604817 344 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AL159169.3-201ENST00000608871 561 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AL121772.2-201ENST00000614331 297 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AC090116.1-201ENST00000615679 446 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AC231759.1-201ENST00000616455 597 ntBASIC4.59□□□□□ -1.67
MBD4O95243 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.59□□□□□ -1.67
MBD4O95243 AC039056.2-201ENST00000622261 511 ntBASIC4.59□□□□□ -1.67
MBD4O95243 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.59□□□□□ -1.67
MBD4O95243 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
MBD4O95243 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.59□□□□□ -1.67
MBD4O95243 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
MBD4O95243 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
MBD4O95243 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.58□□□□□ -1.68
MBD4O95243 UBE3AP2-201ENST00000429033 2259 ntBASIC4.58□□□□□ -1.68
MBD4O95243 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.58□□□□□ -1.68
MBD4O95243 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MBD4O95243 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
MBD4O95243 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MBD4O95243 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MBD4O95243 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
MBD4O95243 Y_RNA.25-201ENST00000362528 102 ntBASIC4.58□□□□□ -1.68
MBD4O95243 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MBD4O95243 MIR93-201ENST00000385024 80 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AL024474.1-201ENST00000404655 591 ntBASIC4.58□□□□□ -1.68
MBD4O95243 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.58□□□□□ -1.68
MBD4O95243 RNU4-22P-201ENST00000411058 166 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC092648.1-201ENST00000425870 423 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AL591419.1-201ENST00000427423 339 ntBASIC4.58□□□□□ -1.68
MBD4O95243 FTH1P6-201ENST00000430768 320 ntBASIC4.58□□□□□ -1.68
MBD4O95243 USP9YP31-201ENST00000431405 881 ntBASIC4.58□□□□□ -1.68
MBD4O95243 RPS6P12-201ENST00000432491 726 ntBASIC4.58□□□□□ -1.68
MBD4O95243 NANOGP2-201ENST00000435391 727 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.58□□□□□ -1.68
MBD4O95243 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.58□□□□□ -1.68
MBD4O95243 AC239367.2-201ENST00000447309 705 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC007327.1-201ENST00000447461 264 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.58□□□□□ -1.68
MBD4O95243 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.58□□□□□ -1.68
MBD4O95243 RFC5P1-201ENST00000454419 874 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC092155.2-201ENST00000454675 477 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.58□□□□□ -1.68
MBD4O95243 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.58□□□□□ -1.68
MBD4O95243 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.58□□□□□ -1.68
MBD4O95243 AC022034.3-201ENST00000471393 478 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AL136126.1-201ENST00000473603 402 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.58□□□□□ -1.68
MBD4O95243 RAC1P2-201ENST00000511164 579 ntBASIC4.58□□□□□ -1.68
MBD4O95243 RNA5SP208-201ENST00000516156 78 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.58□□□□□ -1.68
MBD4O95243 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.58□□□□□ -1.68
MBD4O95243 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.58□□□□□ -1.68
MBD4O95243 AL132857.1-201ENST00000555180 708 ntBASIC4.58□□□□□ -1.68
MBD4O95243 TRAV15-201ENST00000556680 249 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC107954.1-201ENST00000565906 727 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.58□□□□□ -1.68
MBD4O95243 MTCO2P2-201ENST00000591258 225 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.58□□□□□ -1.68
MBD4O95243 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.58□□□□□ -1.68
MBD4O95243 AC025946.2-201ENST00000603398 234 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC016877.3-201ENST00000606778 504 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.58□□□□□ -1.68
MBD4O95243 AC008083.4-201ENST00000615076 444 ntBASIC4.58□□□□□ -1.68
MBD4O95243 AC079684.1-201ENST00000621405 437 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms