Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 DHFRP3-201ENST00000455595 559 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.75□□□□□ -1.49
VAMP4O75379 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 AC006499.2-201ENST00000513470 337 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.75□□□□□ -1.49
VAMP4O75379 MTND5P4-201ENST00000514978 288 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.75□□□□□ -1.49
VAMP4O75379 MTCO2P4-201ENST00000517968 247 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 ARL2BPP5-201ENST00000523141 481 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VAMP4O75379 EIF5A2P1-201ENST00000564027 460 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 AC141257.3-201ENST00000572906 215 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.75□□□□□ -1.49
VAMP4O75379 HMGB2P1-201ENST00000591146 634 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 RPL7P50-201ENST00000600588 727 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 AC103792.1-201ENST00000603591 919 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 PRELID3BP8-201ENST00000604148 295 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 AC010201.1-201ENST00000605051 540 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.75□□□□□ -1.49
VAMP4O75379 AC104985.2-201ENST00000620598 500 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 DUXAP9-208ENST00000622815 614 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.75□□□□□ -1.49
VAMP4O75379 MIR3688-2-201ENST00000636963 87 ntBASIC5.75□□□□□ -1.49
VAMP4O75379 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VAMP4O75379 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.75□□□□□ -1.49
VAMP4O75379 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAMP4O75379 GDI2P1-201ENST00000429312 1336 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
VAMP4O75379 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.74□□□□□ -1.49
VAMP4O75379 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 AC008033.1-201ENST00000216407 1162 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 RNA5SP447-201ENST00000363749 119 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 RNU1-63P-201ENST00000383902 164 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 SNRPFP1-201ENST00000414761 252 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AL807761.1-201ENST00000417622 171 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.74□□□□□ -1.49
VAMP4O75379 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.74□□□□□ -1.49
VAMP4O75379 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.74□□□□□ -1.49
VAMP4O75379 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.74□□□□□ -1.49
VAMP4O75379 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.74□□□□□ -1.49
VAMP4O75379 AL354710.1-201ENST00000453641 246 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AC097493.1-201ENST00000463958 372 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AL672167.3-201ENST00000465951 960 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 HMGB1P36-201ENST00000487709 576 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.74□□□□□ -1.49
VAMP4O75379 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VAMP4O75379 AC022878.1-201ENST00000530684 149 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 MIR5697-201ENST00000578045 78 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AC006504.3-201ENST00000586818 523 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AC005191.1-201ENST00000603950 358 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AL161729.4-201ENST00000604650 476 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AC008966.2-201ENST00000606157 453 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AC104458.1-201ENST00000608243 463 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AP001521.1-201ENST00000609150 300 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 AL592295.2-201ENST00000612578 206 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AL158209.2-201ENST00000619266 216 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 AP005019.3-201ENST00000620418 560 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.74□□□□□ -1.49
VAMP4O75379 AC091905.2-201ENST00000623143 306 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 MIR7641-1-201ENST00000627518 61 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.74□□□□□ -1.49
VAMP4O75379 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
VAMP4O75379 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAMP4O75379 AP001642.1-201ENST00000624727 2117 ntBASIC5.74□□□□□ -1.49
VAMP4O75379 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
VAMP4O75379 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP4O75379 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP4O75379 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP4O75379 AP002001.2-201ENST00000529025 1469 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 Y_RNA.450-201ENST00000384198 113 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 VN1R8P-201ENST00000407739 893 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP4O75379 MTCYBP24-201ENST00000420387 1106 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 AL109913.1-201ENST00000421173 514 ntBASIC5.73□□□□□ -1.49
VAMP4O75379 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms