Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
PRKNO60260 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRKNO60260 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRKNO60260 MIR1284-201ENST00000408337 120 ntBASIC3.78□□□□□ -1.8
PRKNO60260 RN7SKP263-201ENST00000411194 309 ntBASIC3.78□□□□□ -1.8
PRKNO60260 PGBD4P8-201ENST00000412993 562 ntBASIC3.78□□□□□ -1.8
PRKNO60260 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.78□□□□□ -1.8
PRKNO60260 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.78□□□□□ -1.8
PRKNO60260 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.78□□□□□ -1.8
PRKNO60260 TIMM9P2-201ENST00000419324 266 ntBASIC3.78□□□□□ -1.8
PRKNO60260 RPS12P5-201ENST00000423449 371 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC019178.2-201ENST00000423595 505 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.78□□□□□ -1.8
PRKNO60260 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.78□□□□□ -1.8
PRKNO60260 B3GNT2P1-201ENST00000434960 952 ntBASIC3.78□□□□□ -1.8
PRKNO60260 RPS11P1-201ENST00000451072 473 ntBASIC3.78□□□□□ -1.8
PRKNO60260 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.78□□□□□ -1.8
PRKNO60260 RPL38P1-201ENST00000460914 211 ntBASIC3.78□□□□□ -1.8
PRKNO60260 RPL7P1-201ENST00000468161 747 ntBASIC3.78□□□□□ -1.8
PRKNO60260 RPL7P9-201ENST00000468715 747 ntBASIC3.78□□□□□ -1.8
PRKNO60260 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PRKNO60260 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.78□□□□□ -1.8
PRKNO60260 RPL7P38-201ENST00000488396 739 ntBASIC3.78□□□□□ -1.8
PRKNO60260 RPS4XP15-201ENST00000489210 795 ntBASIC3.78□□□□□ -1.8
PRKNO60260 OR4G11P-201ENST00000492842 939 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC092045.1-201ENST00000495716 1231 ntBASIC3.78□□□□□ -1.8
PRKNO60260 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.78□□□□□ -1.8
PRKNO60260 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.78□□□□□ -1.8
PRKNO60260 HMGB1P28-201ENST00000507778 552 ntBASIC3.78□□□□□ -1.8
PRKNO60260 MTND5P13-201ENST00000513046 1079 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.78□□□□□ -1.8
PRKNO60260 RNU7-143P-201ENST00000516781 65 ntBASIC3.78□□□□□ -1.8
PRKNO60260 MIR2116-201ENST00000517221 80 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC134698.5-201ENST00000519444 336 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC027309.2-201ENST00000520566 192 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.78□□□□□ -1.8
PRKNO60260 SLC2A13P1-201ENST00000531560 322 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.78□□□□□ -1.8
PRKNO60260 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.78□□□□□ -1.8
PRKNO60260 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.78□□□□□ -1.8
PRKNO60260 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.78□□□□□ -1.8
PRKNO60260 CYP4A43P-201ENST00000568156 121 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AL121834.1-201ENST00000572284 509 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC012417.1-201ENST00000582307 1039 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC110743.1-201ENST00000584870 478 ntBASIC3.78□□□□□ -1.8
PRKNO60260 NF1P5-201ENST00000588287 448 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.78□□□□□ -1.8
PRKNO60260 VN1R85P-201ENST00000601587 426 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC146944.4-201ENST00000602697 718 ntBASIC3.78□□□□□ -1.8
PRKNO60260 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.78□□□□□ -1.8
PRKNO60260 MIR432-201ENST00000606207 94 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AC135507.1-201ENST00000607214 561 ntBASIC3.78□□□□□ -1.8
PRKNO60260 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.78□□□□□ -1.8
PRKNO60260 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRKNO60260 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PRKNO60260 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PRKNO60260 AC120349.2-201ENST00000625002 298 ntBASIC3.78□□□□□ -1.8
PRKNO60260 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.78□□□□□ -1.8
PRKNO60260 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRKNO60260 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRKNO60260 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PRKNO60260 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PRKNO60260 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRKNO60260 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRKNO60260 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PRKNO60260 AC025125.1-201ENST00000624743 1922 ntBASIC3.78□□□□□ -1.81
PRKNO60260 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRKNO60260 IQCB2P-201ENST00000401788 1633 ntBASIC3.77□□□□□ -1.81
PRKNO60260 MTND4P34-201ENST00000572715 1371 ntBASIC3.77□□□□□ -1.81
PRKNO60260 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PRKNO60260 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.77□□□□□ -1.81
PRKNO60260 AC011477.1-204ENST00000623416 1325 ntBASIC3.77□□□□□ -1.81
PRKNO60260 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.77□□□□□ -1.81
PRKNO60260 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRKNO60260 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PRKNO60260 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PRKNO60260 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRKNO60260 RNU6-984P-201ENST00000363236 109 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AL121978.1-201ENST00000402778 359 ntBASIC3.77□□□□□ -1.81
PRKNO60260 PPIAP31-201ENST00000405422 495 ntBASIC3.77□□□□□ -1.81
PRKNO60260 RNU6-920P-201ENST00000410926 92 ntBASIC3.77□□□□□ -1.81
PRKNO60260 PIGPP2-201ENST00000411569 458 ntBASIC3.77□□□□□ -1.81
PRKNO60260 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 HSFY4P-201ENST00000415994 1181 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC008280.1-201ENST00000418851 412 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.77□□□□□ -1.81
PRKNO60260 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 AC241584.1-201ENST00000438469 1241 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.77□□□□□ -1.81
PRKNO60260 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.77□□□□□ -1.81
PRKNO60260 MTND1P29-201ENST00000448112 647 ntBASIC3.77□□□□□ -1.81
PRKNO60260 AC239809.1-201ENST00000450470 217 ntBASIC3.77□□□□□ -1.81
PRKNO60260 RPL23AP35-201ENST00000451906 501 ntBASIC3.77□□□□□ -1.81
PRKNO60260 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.77□□□□□ -1.81
PRKNO60260 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.77□□□□□ -1.81
PRKNO60260 RPL36AP13-201ENST00000457490 317 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms