Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC28A1O00337 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 AL645568.2-201ENST00000432815 1337 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SLC28A1O00337 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC28A1O00337 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC28A1O00337 SNORA31-201ENST00000362607 130 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 RNU5E-10P-201ENST00000363506 118 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 SNORA7.2-201ENST00000364446 145 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 RNU6-730P-201ENST00000383954 104 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 U1.1-201ENST00000384101 164 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 SNORD65.1-201ENST00000390889 71 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 MTND4LP20-201ENST00000402379 270 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AL024474.1-201ENST00000404655 591 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 RNU2-28P-201ENST00000410457 189 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 HMGB3P20-201ENST00000417997 600 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AL159169.1-201ENST00000421119 127 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AL354692.1-201ENST00000423044 315 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 RPF2P1-201ENST00000424137 906 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 SEPT7P5-201ENST00000434048 306 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AC093155.1-201ENST00000440164 826 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 SETD6P1-201ENST00000444575 317 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AC079776.3-201ENST00000450665 370 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC28A1O00337 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AC013828.1-201ENST00000481845 158 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AC096571.1-202ENST00000506634 735 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AC027309.2-201ENST00000520566 192 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC28A1O00337 MTCYBP41-201ENST00000528913 1123 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 TOMM20P2-201ENST00000540082 421 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AC008127.2-201ENST00000549925 1075 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AC009237.15-201ENST00000610252 501 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AL133445.2-201ENST00000611191 527 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AC084824.4-201ENST00000620106 731 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AC123767.1-202ENST00000620407 817 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC28A1O00337 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC28A1O00337 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC28A1O00337 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC28A1O00337 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC28A1O00337 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC28A1O00337 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC28A1O00337 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.6□□□□□ -1.83
SLC28A1O00337 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.59□□□□□ -1.83
SLC28A1O00337 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SLC28A1O00337 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SLC28A1O00337 AC007685.1-201ENST00000329806 452 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SLC28A1O00337 RNU4-51P-201ENST00000364206 140 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SLC28A1O00337 RNU6-213P-201ENST00000384051 104 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 MIR607-201ENST00000385241 96 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 FNDC3CP-201ENST00000420795 1155 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 AC006989.1-201ENST00000427212 131 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 AC016712.1-201ENST00000431088 378 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 AC114755.5-201ENST00000447760 831 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 AL162151.2-201ENST00000448875 158 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SLC28A1O00337 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.59□□□□□ -1.83
SLC28A1O00337 PABPC1P3-201ENST00000469174 459 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 KLRA1P-201ENST00000503499 986 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 AC093767.1-201ENST00000504523 156 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.59□□□□□ -1.83
SLC28A1O00337 FTH1P21-201ENST00000512179 511 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 AC091163.3-201ENST00000518269 1144 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 AP004371.1-201ENST00000525240 214 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 AC090502.2-201ENST00000549267 280 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.59□□□□□ -1.83
SLC28A1O00337 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.59□□□□□ -1.83
SLC28A1O00337 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.59□□□□□ -1.83
SLC28A1O00337 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SLC28A1O00337 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.59□□□□□ -1.83
SLC28A1O00337 AL606490.9-201ENST00000603331 271 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 AL159169.3-201ENST00000608871 561 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.59□□□□□ -1.83
SLC28A1O00337 AC009269.6-201ENST00000621778 588 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 OR1S1-201ENST00000624470 978 ntBASIC3.59□□□□□ -1.83
SLC28A1O00337 MIR6830-201ENST00000636015 70 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms