Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AL132657.2-201ENST00000564417 358 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 MIR4429-201ENST00000580105 73 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC012417.1-201ENST00000582307 1039 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 MIR4760-201ENST00000585040 80 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 MIR5684-201ENST00000585074 65 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 BNIP3P33-201ENST00000598912 569 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC110741.2-201ENST00000605278 268 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 RNA5SP108-201ENST00000605921 117 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 HMGN2P28-201ENST00000606102 262 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AL354976.1-201ENST00000613843 387 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC090116.1-201ENST00000615679 446 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC023510.2-201ENST00000622162 746 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 MTND5P3-201ENST00000438536 1800 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 SEPT7P7-201ENST00000420492 1301 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 AC095050.2-201ENST00000510748 1458 ntBASIC3.67□□□□□ -1.82
NPIPA3F8WFD2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 ZNF734P-201ENST00000419494 1534 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 XIAPP3-201ENST00000312918 795 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 RNU6-560P-201ENST00000364007 108 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 SNORA51.6-201ENST00000384151 125 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 ATP5F1P3-201ENST00000397213 657 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AL592310.1-201ENST00000414330 671 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 RPL5P24-201ENST00000463742 885 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC092757.1-201ENST00000467293 467 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 RPS4XP15-201ENST00000489210 795 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC010460.2-201ENST00000509054 677 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AP001372.4-201ENST00000524889 472 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC005832.3-201ENST00000537929 631 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AL389895.1-201ENST00000554127 252 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 HSPE1P5-201ENST00000561489 272 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 MIR5685-201ENST00000579080 79 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 BNIP3P26-201ENST00000600827 554 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC113368.1-201ENST00000603736 382 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC104662.1-201ENST00000604448 511 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AL592436.1-201ENST00000605135 558 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 MIR6868-201ENST00000611215 58 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC008083.4-201ENST00000615076 444 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC231759.1-201ENST00000616455 597 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC006133.1-201ENST00000617106 264 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 U73479.1-201ENST00000618062 168 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 AC090897.3-201ENST00000636973 1157 ntBASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.66□□□□□ -1.82
NPIPA3F8WFD2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.65□□□□□ -1.82
NPIPA3F8WFD2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NPIPA3F8WFD2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NPIPA3F8WFD2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NPIPA3F8WFD2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 Y_RNA.493-201ENST00000384422 102 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC016769.3-201ENST00000396562 315 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AL590084.1-201ENST00000407885 387 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 RNA5SP80-201ENST00000410475 111 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 OFD1P18Y-201ENST00000420889 959 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC092832.1-201ENST00000422934 400 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 VN1R10P-201ENST00000447106 875 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 USP9YP25-201ENST00000457708 443 ntBASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA3F8WFD2 PLGLA-201ENST00000465668 449 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms