Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.57□□□□□ -1.84
RGPD3A6NKT7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RGPD3A6NKT7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.57□□□□□ -1.84
RGPD3A6NKT7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RGPD3A6NKT7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RGPD3A6NKT7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RGPD3A6NKT7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 ELL2P4-201ENST00000446870 1376 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 RNA5SP502-201ENST00000362694 119 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 HMGB3P12-201ENST00000438745 556 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 OR5H3P-201ENST00000502817 919 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 LINC01355-201ENST00000566551 5444 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 TAB3P1-202ENST00000452645 1634 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 MIR1183-201ENST00000408856 89 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AL049610.1-201ENST00000423374 372 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 FAM172BP-201ENST00000487497 1089 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 SRIP1-201ENST00000489235 288 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC019227.1-201ENST00000526902 510 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 DNAJC19P3-201ENST00000594491 331 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AC025811.1-201ENST00000604312 472 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 AL392112.1-201ENST00000605115 829 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
RGPD3A6NKT7 MTCO1P9-201ENST00000505577 1534 ntBASIC3.56□□□□□ -1.84
RGPD3A6NKT7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 RN7SKP58-201ENST00000411010 305 ntBASIC3.55□□□□□ -1.84
RGPD3A6NKT7 OR51A3P-201ENST00000413596 924 ntBASIC3.55□□□□□ -1.84
RGPD3A6NKT7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 AL591806.2-201ENST00000433122 173 ntBASIC3.55□□□□□ -1.84
RGPD3A6NKT7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 RNA5SP320-201ENST00000516263 124 ntBASIC3.55□□□□□ -1.84
RGPD3A6NKT7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 AC006111.3-201ENST00000622137 383 ntBASIC3.55□□□□□ -1.84
RGPD3A6NKT7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RGPD3A6NKT7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RGPD3A6NKT7 MIR1289-2-201ENST00000408360 111 ntBASIC3.54□□□□□ -1.84
RGPD3A6NKT7 ISCA1P6-201ENST00000427740 390 ntBASIC3.54□□□□□ -1.84
RGPD3A6NKT7 RPL23AP22-201ENST00000437556 453 ntBASIC3.54□□□□□ -1.84
RGPD3A6NKT7 AC004801.2-202ENST00000463559 283 ntBASIC3.54□□□□□ -1.84
RGPD3A6NKT7 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
RGPD3A6NKT7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.54□□□□□ -1.84
RGPD3A6NKT7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.54□□□□□ -1.84
RGPD3A6NKT7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.54□□□□□ -1.84
RGPD3A6NKT7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.54□□□□□ -1.84
RGPD3A6NKT7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RGPD3A6NKT7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 HMGN1P18-201ENST00000457642 277 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC243972.3-201ENST00000539655 198 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC093831.2-201ENST00000624393 3427 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AL356057.3-201ENST00000402607 340 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 GTF2IP23-201ENST00000423746 351 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC133134.1-201ENST00000466800 359 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC096725.1-201ENST00000514266 313 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 FABP5P12-201ENST00000515543 389 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 RNA5SP458-201ENST00000516188 119 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC078899.5-201ENST00000612475 178 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC008121.2-201ENST00000614647 523 ntBASIC3.53□□□□□ -1.84
RGPD3A6NKT7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RGPD3A6NKT7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.53□□□□□ -1.85
RGPD3A6NKT7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
RGPD3A6NKT7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RGPD3A6NKT7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.52□□□□□ -1.85
RGPD3A6NKT7 SYT14P1-202ENST00000600441 1448 ntBASIC3.52□□□□□ -1.85
RGPD3A6NKT7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
RGPD3A6NKT7 AL583834.1-201ENST00000406943 343 ntBASIC3.52□□□□□ -1.85
RGPD3A6NKT7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms